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MYB-related Family Description Reference ClustAlW Alignment Hidden Markov Model Nucleotide Sequences Protein Sequences

Bernd Weisshaar & Ralf Stracke from Bielefeld University, have kindly provided feedback for MYB-Related family transcription factor

(M)IPS <> (S)ALK <> T(A)IR
(C)onfirmed direct targets (U)nconfirmed direct targets

There are currently 67 members identified for this family
TF Locus Id Protein Name Sub Family Gene Name , Synonym Links Sequences BindingSites/NFM Direct Targets Total Direct Interactions
At5g04100   Atypical MYB genes   MSA Nucl-Prot      
At1g09770   Atypical MYB genes ATCDC5, ATMYBCDC5, CDC5 MSA Nucl-Prot      
At3g18100   Atypical MYB genes AtMYB4R1, MYB4R1 MSA Nucl-Prot      
At5g41020   Atypical MYB genes   MSA Nucl-Prot      
At2g03470   Atypical MYB genes   MSA Nucl-Prot      
At2g13960   Atypical MYB genes   MSA Nucl-Prot      
At4g11400   Atypical MYB genes   MSA Nucl-Prot      
At2g46830   CCA1-like CCA1 MSA Nucl-Prot   C(5)  -  U(1) VIEW (11)
At1g18330   CCA1-like EPR1 MSA Nucl-Prot     VIEW (2)
At1g01060   CCA1-like LHY, LHY1 MSA Nucl-Prot   C(4)  -  U(1) VIEW (7)
At4g01280   CCA1-like   MSA Nucl-Prot      
At4g09450   CCA1-like   MSA Nucl-Prot      
At5g02840   CCA1-like LCL1 MSA Nucl-Prot   C(4)  -  U(4) VIEW (9)
At5g47390   CCA1-like   MSA Nucl-Prot     VIEW (2)
At5g52660   CCA1-like   MSA Nucl-Prot     VIEW (1)
At5g56840   CCA1-like   MSA Nucl-Prot     VIEW (1)
At5g61620   CCA1-like   MSA Nucl-Prot      
At3g16350   CCA1-like   MSA Nucl-Prot      
At1g19000   CCA1-like   MSA Nucl-Prot   C(1)  -  U(1) VIEW (5)
At5g37260   CCA1-like CIR1, RVE2 MSA Nucl-Prot      
At1g74840   CCA1-like   MSA Nucl-Prot     VIEW (3)
At1g01520   CCA1-like   MSA Nucl-Prot     VIEW (1)
At3g10590   CCA1-like   MSA Nucl-Prot      
At3g10580   CCA1-like   MSA Nucl-Prot      
At3g10113   CCA1-like   MSA Nucl-Prot     VIEW (2)
At1g70000   CCA1-like   MSA Nucl-Prot     VIEW (1)
At3g09600   CCA1-like   MSA Nucl-Prot     VIEW (1)
At1g58220   CPC-like   MSA Nucl-Prot      
At1g09710   CPC-like   MSA Nucl-Prot      
At5g53200   CPC-like TRY MSA Nucl-Prot     VIEW (8)
At2g46410   CPC-like CPC MSA Nucl-Prot     VIEW (5)
At2g30420   CPC-like ETC2 MSA Nucl-Prot      
At1g71030   CPC-like ATMYBL2, MYBL2 MSA Nucl-Prot     VIEW (4)
At4g01060   CPC-like CPL3, ETC3 MSA Nucl-Prot     VIEW (5)
At1g18960   CPC-like   MSA Nucl-Prot      
At1g01380   CPC-like ETC1 MSA Nucl-Prot     VIEW (1)
At5g59430   HPPBF-2 ATTRP1, TRP1 MSA Nucl-Prot     VIEW (3)
At5g67580   HPPBF-3 ATTBP3, ATTRB2, TBP3, TRB2 MSA Nucl-Prot      
At1g19510   I-box-binding-like ATRL5 MSA Nucl-Prot      
At1g75250   I-box-binding-like ATRL6 MSA Nucl-Prot     VIEW (2)
At2g21650   I-box-binding-like ATRL2, MEE3 MSA Nucl-Prot     VIEW (3)
At4g36570   I-box-binding-like ATRL3 MSA Nucl-Prot      
At4g39250   I-box-binding-like ATRL1 MSA Nucl-Prot      
At5g23650   R-R -type   MSA Nucl-Prot      
At1g49010   R-R -type   MSA Nucl-Prot     VIEW (1)
At2g38090   R-R -type   MSA Nucl-Prot     VIEW (2)
At3g11280   R-R -type   MSA Nucl-Prot   C(2)  -  U(2) VIEW (6)
At5g01200   R-R -type   MSA Nucl-Prot   C(1)  -  U(1) VIEW (3)
At5g04760   R-R -type   MSA Nucl-Prot     VIEW (2)
At5g05790   R-R -type   MSA Nucl-Prot      
At5g08520   R-R -type   MSA Nucl-Prot   C(5)  -  U(2) VIEW (8)
At5g58900   R-R -type   MSA Nucl-Prot     VIEW (5)
At1g17520   TBP-like   MSA Nucl-Prot      
At5g13820   TBP-like ATBP-1, ATBP1, ATTBP1, HPPBF-1, TBP1 MSA Nucl-Prot     VIEW (3)
At1g06910   TBP-like TRFL7 MSA Nucl-Prot     VIEW (1)
At1g15720   TBP-like TRFL5 MSA Nucl-Prot      
At4g12670   TBP-like   MSA Nucl-Prot      
At1g17460   TBP-like TRFL3 MSA Nucl-Prot     VIEW (1)
At1g49950   TBP-like ATTRB1, TRB1 MSA Nucl-Prot      
At1g72650   TBP-like TRFL6 MSA Nucl-Prot     VIEW (1)
At1g72740   TBP-like   MSA Nucl-Prot      
At3g12560   TBP-like ATTBP2, TRFL9 MSA Nucl-Prot     VIEW (2)
At3g46590   TBP-like ATTRP2, TRFL1, TRP2 MSA Nucl-Prot     VIEW (1)
At3g49850   TBP-like ATTRB3, TBP2, TRB3 MSA Nucl-Prot      
At3g53790   TBP-like TRFL4 MSA Nucl-Prot      
At5g03780   TBP-like TRFL10 MSA Nucl-Prot      
At1g07540   TBP-like TRFL2 MSA Nucl-Prot     VIEW (3)

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