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Summary of properties of promoter region AT1G03790


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G03790 hypothetical protein Chr1:951648 - 954523 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G03790

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 953047 953052 cacatg BHLH
AtMYC2 BS in RD22 954236 954241 cacatg BHLH
AtMYC2 BS in RD22 954237 954242 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 952274 952281 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 953686 953693 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 953682 953687 actcat bZIP
ARF1 binding site motif 951923 951928 tgtctc ARF
DPBF1&2 binding site motif 953034 953040 acacttg bZIP
DPBF1&2 binding site motif 953046 953052 acacatg bZIP
DPBF1&2 binding site motif 954237 954243 acacatg bZIP
DPBF1&2 binding site motif 952751 952757 acactgg bZIP
MYB4 binding site motif 953975 953981 aacaaac MYB
MYB4 binding site motif 954072 954078 aacaaac MYB
MYB4 binding site motif 954242 954248 acctaac MYB
MYB4 binding site motif 954118 954124 aactaac MYB
RAV1-A binding site motif 953017 953021 caaca ABI3VP1
RAV1-A binding site motif 954186 954190 caaca ABI3VP1
RAV1-A binding site motif 953201 953205 caaca ABI3VP1
RAV1-A binding site motif 952284 952288 caaca ABI3VP1
LFY consensus binding site motif 952752 952757 ccagtg LFY
LFY consensus binding site motif 953019 953024 ccattg LFY
ARF binding site motif 951923 951928 tgtctc ...
BoxII promoter motif 953415 953420 ggttaa ...
BoxII promoter motif 952371 952376 ggttaa ...
GATA promoter motif [LRE] 952473 952478 agatag ...
GATA promoter motif [LRE] 953077 953082 agatag ...
GATA promoter motif [LRE] 953124 953129 tgataa ...
GATA promoter motif [LRE] 953831 953836 agataa ...
GATA promoter motif [LRE] 954190 954195 tgataa ...
GATA promoter motif [LRE] 954412 954417 tgataa ...
GATA promoter motif [LRE] 954313 954318 agataa ...
GATA promoter motif [LRE] 953989 953994 tgataa ...
GATA promoter motif [LRE] 952377 952382 tgataa ...
GATA promoter motif [LRE] 952354 952359 tgataa ...
G-box promoter motif [LRE] 952365 952370 cacgtg ...
G-box promoter motif [LRE] 952364 952369 cacgtg ...
Hexamer promoter motif 952767 952772 ccgtcg ...
Ibox promoter motif 954191 954196 gataag ...
Ibox promoter motif 954312 954317 gataag ...
Ibox promoter motif 953988 953993 gataag ...
Ibox promoter motif 952376 952381 gataag ...
Ibox promoter motif 952001 952006 gataag ...
L1-box promoter motif 952805 952812 taaatgta ...
T-box promoter motif 954050 954055 actttg ...
T-box promoter motif 954042 954047 actttg ...
TELO-box promoter motif 952218 952226 aaaccctaa ...
TELO-box promoter motif 951741 951749 aaaccctaa ...
Z-box promoter motif 953163 953170 atacgtgt ...
SORLREP3 952589 952597 tgtatatat ...
SORLIP1 953010 953015 agccac ...

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