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Summary of properties of promoter region AT1G04000


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G04000 expressed protein Chr1:1029116 - 1031872 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G04000

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
Bellringer/replumless/pennywise BS1 IN AG 1030263 1030270 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1031600 1031605 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1030216 1030221 actcat bZIP
W-box promoter motif 1030276 1030281 ttgact WRKY
W-box promoter motif 1029876 1029881 ttgact WRKY
W-box promoter motif 1029484 1029489 ttgacc WRKY
ATHB2 binding site motif 1030910 1030918 taataatta HB
CCA1 binding site motif 1030945 1030952 aaaaatct MYB-related
MYB binding site promoter 1029383 1029390 aaccaacc MYB
MYB binding site promoter 1031854 1031861 aacctacc MYB
MYB binding site promoter 1030204 1030211 aaccaaac MYB
MYB4 binding site motif 1029373 1029379 aacaaac MYB
MYB4 binding site motif 1029384 1029390 accaacc MYB
MYB4 binding site motif 1031855 1031861 acctacc MYB
MYB4 binding site motif 1030204 1030210 accaaac MYB
MYB4 binding site motif 1029731 1029737 accaacc MYB
RAV1-A binding site motif 1029372 1029376 caaca ABI3VP1
RAV1-A binding site motif 1030486 1030490 caaca ABI3VP1
RAV1-A binding site motif 1031327 1031331 caaca ABI3VP1
LFY consensus binding site motif 1031719 1031724 ccattg LFY
LFY consensus binding site motif 1030418 1030423 ccaatg LFY
BoxII promoter motif 1029380 1029385 ggttaa ...
GATA promoter motif [LRE] 1029560 1029565 tgatag ...
GATA promoter motif [LRE] 1029885 1029890 tgataa ...
GATA promoter motif [LRE] 1029933 1029938 agatag ...
GATA promoter motif [LRE] 1030128 1030133 tgataa ...
GATA promoter motif [LRE] 1030561 1030566 tgataa ...
GATA promoter motif [LRE] 1031314 1031319 tgataa ...
GATA promoter motif [LRE] 1030040 1030045 tgataa ...
GATA promoter motif [LRE] 1029343 1029348 agataa ...
GATA promoter motif [LRE] 1029132 1029137 agataa ...
Ibox promoter motif 1030129 1030134 gataag ...
Ibox promoter motif 1029131 1029136 gataag ...
L1-box promoter motif 1031190 1031197 taaatgca ...
T-box promoter motif 1029595 1029600 actttg ...
T-box promoter motif 1030735 1030740 actttg ...
T-box promoter motif 1031129 1031134 actttg ...
T-box promoter motif 1029233 1029238 actttg ...

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