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Summary of properties of promoter region AT1G05580


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G05580 hypothetical protein Chr1:1668897 - 1669868 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G05580

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
Bellringer/replumless/pennywise BS2 IN AG 1669855 1669862 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 1669854 1669861 actaattt Homeobox
W-box promoter motif 1669289 1669294 ttgact WRKY
ATHB2 binding site motif 1669471 1669479 taataatta HB
DPBF1&2 binding site motif 1668975 1668981 acacaag bZIP
MYB binding site promoter 1669726 1669733 cacctaac MYB
MYB4 binding site motif 1669727 1669733 acctaac MYB
MYB4 binding site motif 1669126 1669132 aacaacc MYB
RAV1-A binding site motif 1668957 1668961 caaca ABI3VP1
RAV1-A binding site motif 1669683 1669687 caaca ABI3VP1
RAV1-A binding site motif 1669050 1669054 caaca ABI3VP1
LFY consensus binding site motif 1669788 1669793 ccaatg LFY
BoxII promoter motif 1669774 1669779 ggttaa ...
GATA promoter motif [LRE] 1669096 1669101 tgataa ...
GATA promoter motif [LRE] 1669750 1669755 tgataa ...
GATA promoter motif [LRE] 1669533 1669538 agatag ...
GATA promoter motif [LRE] 1669330 1669335 agataa ...
GATA promoter motif [LRE] 1669132 1669137 tgataa ...
Ibox promoter motif 1669751 1669756 gataag ...
Ibox promoter motif 1669329 1669334 gataag ...
T-box promoter motif 1669365 1669370 actttg ...
T-box promoter motif 1669348 1669353 actttg ...

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