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Summary of properties of promoter region AT1G15550


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G15550 gibberellin 3 beta-hydroxylase Chr1:5346159 - 5349161 Get Sequence Predicted TAIR VIEW

Current list of binding sites and references


Binding Sites in upstream region of AT1G15550

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 5348073 5348079 ctaacca MYB
AtMYC2 BS in RD22 5348913 5348918 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 5346604 5346611 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 5346663 5346670 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 5347053 5347060 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 5348499 5348506 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 5348500 5348507 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 5347075 5347080 actcat bZIP
W-box promoter motif 5348506 5348511 ttgacc WRKY
ARF1 binding site motif 5348461 5348466 tgtctc ARF
ARF1 binding site motif 5348739 5348744 tgtctc ARF
ATHB1 binding site motif 5348640 5348648 caataattg HB
ATHB1 binding site motif 5348639 5348647 caattattg HB
ATHB2 binding site motif 5346796 5346804 taataatta HB
ATHB5 binding site motif 5348640 5348648 caataattg HB
ATHB5 binding site motif 5348639 5348647 caattattg HB
ATHB6 binding site motif 5346209 5346217 caattatta HB
DPBF1&2 binding site motif 5347170 5347176 acacttg bZIP
DPBF1&2 binding site motif 5348913 5348919 acacatg bZIP
DPBF1&2 binding site motif 5347512 5347518 acacacg bZIP
DPBF1&2 binding site motif 5346463 5346469 acactag bZIP
MYB binding site promoter 5349009 5349016 aaccaaac MYB
MYB4 binding site motif 5346167 5346173 accaaac MYB
MYB4 binding site motif 5347392 5347398 accaaac MYB
MYB4 binding site motif 5349014 5349020 aacaaac MYB
MYB4 binding site motif 5347079 5347085 aacaaac MYB
RAV1-A binding site motif 5346280 5346284 caaca ABI3VP1
RAV1-A binding site motif 5346740 5346744 caaca ABI3VP1
RAV1-A binding site motif 5348400 5348404 caaca ABI3VP1
RAV1-A binding site motif 5348496 5348500 caaca ABI3VP1
RAV1-A binding site motif 5348700 5348704 caaca ABI3VP1
RAV1-A binding site motif 5348656 5348660 caaca ABI3VP1
RAV1-A binding site motif 5348567 5348571 caaca ABI3VP1
RAV1-A binding site motif 5348359 5348363 caaca ABI3VP1
RAV1-A binding site motif 5347148 5347152 caaca ABI3VP1
RAV1-A binding site motif 5347082 5347086 caaca ABI3VP1
LFY consensus binding site motif 5348675 5348680 ccaatg LFY
LFY consensus binding site motif 5348402 5348407 ccaatg LFY
ABRE-like binding site motif 5347871 5347878 gacgtggc ...
ARF binding site motif 5348461 5348466 tgtctc ...
ARF binding site motif 5348739 5348744 tgtctc ...
BoxII promoter motif 5347686 5347691 ggttaa ...
EveningElement promoter motif 5346520 5346528 aaaatatct ...
GATA promoter motif [LRE] 5346475 5346480 agataa ...
GATA promoter motif [LRE] 5348046 5348051 agataa ...
GATA promoter motif [LRE] 5348145 5348150 agatag ...
GATA promoter motif [LRE] 5348347 5348352 agataa ...
GATA promoter motif [LRE] 5348927 5348932 agataa ...
GATA promoter motif [LRE] 5348167 5348172 agatag ...
GATA promoter motif [LRE] 5347789 5347794 agataa ...
GATA promoter motif [LRE] 5347335 5347340 agataa ...
GATA promoter motif [LRE] 5346969 5346974 tgataa ...
GATA promoter motif [LRE] 5346301 5346306 tgataa ...
G-box promoter motif [LRE] 5347511 5347516 cacgtg ...
G-box promoter motif [LRE] 5347510 5347515 cacgtg ...
Hexamer promoter motif 5346879 5346884 ccgtcg ...
Ibox promoter motif 5348348 5348353 gataag ...
Ibox promoter motif 5348926 5348931 gataag ...
Ibox promoter motif 5347334 5347339 gataag ...
T-box promoter motif 5347411 5347416 actttg ...
T-box promoter motif 5348236 5348241 actttg ...
SORLREP1 5347698 5347707 ttatactagt ...
SORLREP3 5347520 5347528 tgtatatat ...
SORLREP3 5347420 5347428 tgtatatat ...
SORLIP2 5348406 5348410 gggcc ...

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