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Summary of properties of promoter region AT1G16840


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G16840 expressed protein Chr1:5764064 - 5765053 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G16840

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 5764179 5764184 cacatg BHLH
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 5764217 5764222 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 5764346 5764351 actcat bZIP
ARF1 binding site motif 5765046 5765051 tgtctc ARF
ATHB5 binding site motif 5764626 5764634 caatgattg HB
ATHB5 binding site motif 5764625 5764633 caatcattg HB
RAV1-A binding site motif 5764429 5764433 caaca ABI3VP1
RAV1-A binding site motif 5764166 5764170 caaca ABI3VP1
LFY consensus binding site motif 5764484 5764489 ccactg LFY
LFY consensus binding site motif 5764625 5764630 ccaatg LFY
ARF binding site motif 5765046 5765051 tgtctc ...
BoxII promoter motif 5764389 5764394 ggttaa ...
DRE-like promoter motif 5764948 5764956 agccgactt ...
DRE-like promoter motif 5764705 5764713 taccgacaa ...
EveningElement promoter motif 5764568 5764576 aaaatatct ...
GATA promoter motif [LRE] 5764681 5764686 agatag ...
GATA promoter motif [LRE] 5764783 5764788 agataa ...
GATA promoter motif [LRE] 5764728 5764733 tgataa ...
GATA promoter motif [LRE] 5764497 5764502 agataa ...
LTRE promoter motif 5764706 5764712 accgaca ...
T-box promoter motif 5764774 5764779 actttg ...

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