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Summary of properties of promoter region AT1G18200


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G18200 small GTP-binding protein (RAB11F) Chr1:6266651 - 6267960 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G18200

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 6266666 6266671 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 6266963 6266970 aaattaaa Homeobox
W-box promoter motif 6267244 6267249 ttgact WRKY
W-box promoter motif 6267494 6267499 ttgact WRKY
W-box promoter motif 6267311 6267316 ttgact WRKY
W-box promoter motif 6267196 6267201 ttgacc WRKY
W-box promoter motif 6266727 6266732 ttgacc WRKY
MYB binding site promoter 6267318 6267325 aacctaac MYB
MYB4 binding site motif 6267319 6267325 acctaac MYB
MYB4 binding site motif 6267853 6267859 aacaaac MYB
LFY consensus binding site motif 6267885 6267890 ccattg LFY
GATA promoter motif [LRE] 6266748 6266753 tgatag ...
GATA promoter motif [LRE] 6267271 6267276 tgataa ...
GATA promoter motif [LRE] 6267507 6267512 agatag ...
GATA promoter motif [LRE] 6267934 6267939 tgataa ...
Ibox promoter motif 6267512 6267517 gataag ...
Ibox promoter motif 6267933 6267938 gataag ...
RY-repeat promoter motif 6267389 6267396 catgcatg ...
RY-repeat promoter motif 6267388 6267395 catgcatg ...
T-box promoter motif 6266685 6266690 actttg ...
SORLIP2 6267287 6267291 gggcc ...

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