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Summary of properties of promoter region AT1G20050


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G20050 C-87 sterol isomerase Chr1:6947333 - 6949059 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G20050

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 6948349 6948354 cacatg BHLH
AtMYC2 BS in RD22 6948350 6948355 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 6948582 6948589 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 6947411 6947418 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 6947335 6947342 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 6947336 6947343 actaattt Homeobox
ATHB2 binding site motif 6947429 6947437 taataatta HB
ATHB2 binding site motif 6948626 6948634 taataatta HB
ATHB2 binding site motif 6947431 6947439 taataatta HB
DPBF1&2 binding site motif 6947582 6947588 acacaag bZIP
DPBF1&2 binding site motif 6949020 6949026 acacttg bZIP
DPBF1&2 binding site motif 6948497 6948503 acactcg bZIP
DPBF1&2 binding site motif 6947584 6947590 acacttg bZIP
MYB4 binding site motif 6948221 6948227 aacaaac MYB
MYB4 binding site motif 6948704 6948710 aacaaac MYB
MYB4 binding site motif 6949008 6949014 accaaac MYB
RAV1-A binding site motif 6947441 6947445 caaca ABI3VP1
RAV1-A binding site motif 6948795 6948799 caaca ABI3VP1
RAV1-A binding site motif 6947499 6947503 caaca ABI3VP1
RAV1-A binding site motif 6947493 6947497 caaca ABI3VP1
RAV1-A binding site motif 6947446 6947450 caaca ABI3VP1
BoxII promoter motif 6948331 6948336 ggttaa ...
GATA promoter motif [LRE] 6948042 6948047 tgataa ...
GATA promoter motif [LRE] 6948564 6948569 tgataa ...
GATA promoter motif [LRE] 6948845 6948850 agataa ...
GATA promoter motif [LRE] 6948436 6948441 tgatag ...
GATA promoter motif [LRE] 6947829 6947834 tgataa ...
GATA promoter motif [LRE] 6947576 6947581 tgataa ...
GATA promoter motif [LRE] 6947504 6947509 tgataa ...
GCC-box promoter motif 6947804 6947809 gccgcc ...
T-box promoter motif 6947648 6947653 actttg ...
T-box promoter motif 6948391 6948396 actttg ...

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