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Summary of properties of promoter region AT1G28300


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G28300 expressed protein Chr1:9899861 - 9902863 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G28300

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 9901560 9901566 ctaacca MYB
AtMYC2 BS in RD22 9902643 9902648 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 9902059 9902066 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 9902204 9902211 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 9901754 9901761 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 9900077 9900084 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 9900078 9900085 actaattt Homeobox
W-box promoter motif 9900295 9900300 ttgacc WRKY
W-box promoter motif 9902010 9902015 ttgact WRKY
W-box promoter motif 9902757 9902762 ttgact WRKY
W-box promoter motif 9901579 9901584 ttgact WRKY
ARF1 binding site motif 9902790 9902795 tgtctc ARF
ARF1 binding site motif 9901697 9901702 tgtctc ARF
ATHB2 binding site motif 9902382 9902390 taataatta HB
CCA1 binding site motif 9900354 9900361 aaaaatct MYB-related
CCA1 binding site motif 9902245 9902252 aaaaatct MYB-related
CCA1 binding site motif 9900554 9900561 aaaaatct MYB-related
DPBF1&2 binding site motif 9902642 9902648 acacatg bZIP
DPBF1&2 binding site motif 9902650 9902656 acactag bZIP
DPBF1&2 binding site motif 9901895 9901901 acacacg bZIP
DPBF1&2 binding site motif 9900787 9900793 acacttg bZIP
MYB binding site promoter 9900499 9900506 aaccaaac MYB
MYB4 binding site motif 9900813 9900819 aacaaac MYB
MYB4 binding site motif 9901546 9901552 accaaac MYB
MYB4 binding site motif 9900499 9900505 accaaac MYB
RAV1-A binding site motif 9899869 9899873 caaca ABI3VP1
RAV1-A binding site motif 9902750 9902754 caaca ABI3VP1
RAV1-A binding site motif 9902783 9902787 caaca ABI3VP1
RAV1-A binding site motif 9901021 9901025 caaca ABI3VP1
RAV1-A binding site motif 9900960 9900964 caaca ABI3VP1
RAV1-A binding site motif 9900408 9900412 caaca ABI3VP1
LFY consensus binding site motif 9901262 9901267 ccattg LFY
LFY consensus binding site motif 9902568 9902573 ccaatg LFY
LFY consensus binding site motif 9901456 9901461 ccaatg LFY
LFY consensus binding site motif 9900873 9900878 ccattg LFY
ARF binding site motif 9902790 9902795 tgtctc ...
ARF binding site motif 9901697 9901702 tgtctc ...
GATA promoter motif [LRE] 9900280 9900285 tgataa ...
GATA promoter motif [LRE] 9900696 9900701 tgataa ...
GATA promoter motif [LRE] 9900944 9900949 tgataa ...
GATA promoter motif [LRE] 9901444 9901449 tgatag ...
GATA promoter motif [LRE] 9901491 9901496 tgatag ...
GATA promoter motif [LRE] 9901600 9901605 tgataa ...
GATA promoter motif [LRE] 9902071 9902076 agataa ...
GATA promoter motif [LRE] 9901845 9901850 tgatag ...
GATA promoter motif [LRE] 9901592 9901597 agataa ...
GATA promoter motif [LRE] 9900857 9900862 agataa ...
GCC-box promoter motif 9901387 9901392 gccgcc ...
Ibox promoter motif 9900697 9900702 gataag ...
Ibox promoter motif 9900856 9900861 gataag ...
L1-box promoter motif 9902391 9902398 taaatgca ...
T-box promoter motif 9901643 9901648 actttg ...

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