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Summary of properties of promoter region AT1G30490


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G30490 HD-Zip transcription factor Athb-9 Chr1:10800884 - 10803885 Get Sequence Predicted TAIR VIEW

Current list of binding sites and references


Binding Sites in upstream region of AT1G30490

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 10800926 10800931 cacatg BHLH
AtMYC2 BS in RD22 10802496 10802501 cacatg BHLH
AtMYC2 BS in RD22 10802171 10802176 cacatg BHLH
AtMYC2 BS in RD22 10800927 10800932 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 10803630 10803637 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 10801736 10801743 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 10803444 10803449 actcat bZIP
CArG promoter motif 10802407 10802416 ccaattaagg MADS
CArG promoter motif 10802406 10802415 ccttaattgg MADS
ARF1 binding site motif 10802198 10802203 tgtctc ARF
ARF1 binding site motif 10802856 10802861 tgtctc ARF
ATHB2 binding site motif 10802236 10802244 taataatta HB
ATHB6 binding site motif 10802828 10802836 caattatta HB
DPBF1&2 binding site motif 10801664 10801670 acacgtg bZIP
DPBF1&2 binding site motif 10800927 10800933 acacatg bZIP
MYB binding site promoter 10801379 10801386 aaccaacc MYB
MYB1 binding site motif 10803867 10803874 ctccaacc MYB
MYB1 binding site motif 10802026 10802033 atccaacc MYB
MYB4 binding site motif 10801380 10801386 accaacc MYB
MYB4 binding site motif 10801518 10801524 aacaaac MYB
MYB4 binding site motif 10801792 10801798 aacaaac MYB
MYB4 binding site motif 10803678 10803684 aacaacc MYB
MYB4 binding site motif 10802285 10802291 aacaaac MYB
RAV1-A binding site motif 10801074 10801078 caaca ABI3VP1
RAV1-A binding site motif 10801777 10801781 caaca ABI3VP1
RAV1-A binding site motif 10801791 10801795 caaca ABI3VP1
RAV1-A binding site motif 10802005 10802009 caaca ABI3VP1
RAV1-A binding site motif 10802431 10802435 caaca ABI3VP1
RAV1-A binding site motif 10802521 10802525 caaca ABI3VP1
RAV1-A binding site motif 10802718 10802722 caaca ABI3VP1
RAV1-A binding site motif 10802861 10802865 caaca ABI3VP1
RAV1-A binding site motif 10802970 10802974 caaca ABI3VP1
RAV1-A binding site motif 10803673 10803677 caaca ABI3VP1
RAV1-A binding site motif 10802873 10802877 caaca ABI3VP1
RAV1-A binding site motif 10802068 10802072 caaca ABI3VP1
RAV1-A binding site motif 10802022 10802026 caaca ABI3VP1
RAV1-A binding site motif 10801999 10802003 caaca ABI3VP1
RAV1-A binding site motif 10801994 10801998 caaca ABI3VP1
RAV1-A binding site motif 10800931 10800935 caaca ABI3VP1
LFY consensus binding site motif 10801132 10801137 ccattg LFY
LFY consensus binding site motif 10802633 10802638 ccactg LFY
LFY consensus binding site motif 10801870 10801875 ccattg LFY
ABRE-like binding site motif 10801662 10801669 cacgtgta ...
ARF binding site motif 10802198 10802203 tgtctc ...
ARF binding site motif 10802856 10802861 tgtctc ...
BoxII promoter motif 10802415 10802420 ggttaa ...
BoxII promoter motif 10803584 10803589 ggttaa ...
BoxII promoter motif 10802416 10802421 ggttaa ...
BoxII promoter motif 10801549 10801554 ggttaa ...
GATA promoter motif [LRE] 10802510 10802515 agatag ...
GATA promoter motif [LRE] 10802779 10802784 agataa ...
GATA promoter motif [LRE] 10802826 10802831 tgataa ...
GATA promoter motif [LRE] 10803387 10803392 tgataa ...
GATA promoter motif [LRE] 10803405 10803410 tgataa ...
GATA promoter motif [LRE] 10803440 10803445 tgataa ...
GATA promoter motif [LRE] 10803449 10803454 tgataa ...
GATA promoter motif [LRE] 10803215 10803220 agataa ...
GATA promoter motif [LRE] 10801888 10801893 tgatag ...
GATA promoter motif [LRE] 10801772 10801777 tgatag ...
GATA promoter motif [LRE] 10801162 10801167 agatag ...
G-box promoter motif [LRE] 10801665 10801670 cacgtg ...
G-box promoter motif [LRE] 10801664 10801669 cacgtg ...
Ibox promoter motif 10802795 10802800 gataag ...
L1-box promoter motif 10802921 10802928 taaatgca ...
T-box promoter motif 10801472 10801477 actttg ...
T-box promoter motif 10802866 10802871 actttg ...
T-box promoter motif 10803560 10803565 actttg ...
T-box promoter motif 10803414 10803419 actttg ...
T-box promoter motif 10802331 10802336 actttg ...
T-box promoter motif 10801917 10801922 actttg ...
TELO-box promoter motif 10802308 10802316 aaaccctaa ...

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