AGRIS logo
Home AtcisDB AtTFDB Regulatory
Network
People Downloads External Resources Publications

Summary of properties of promoter region AT1G43850


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G43850 unknown protein Chr1:16616589 - 16619591 Get Sequence Predicted TAIR VIEW

Current list of binding sites and references


Binding Sites in upstream region of AT1G43850

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
Bellringer/replumless/pennywise BS1 IN AG 16617160 16617167 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 16616689 16616694 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 16618257 16618262 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 16618117 16618122 actcat bZIP
W-box promoter motif 16616860 16616865 ttgacc WRKY
W-box promoter motif 16618382 16618387 ttgact WRKY
W-box promoter motif 16618424 16618429 ttgact WRKY
W-box promoter motif 16619468 16619473 ttgact WRKY
CCA1 binding site motif 16617665 16617672 aaaaatct MYB-related
CCA1 binding site motif 16617393 16617400 aaaaatct MYB-related
DPBF1&2 binding site motif 16616918 16616924 acacttg bZIP
DPBF1&2 binding site motif 16616793 16616799 acactcg bZIP
MYB binding site promoter 16616905 16616912 aaccaaac MYB
MYB binding site promoter 16619240 16619247 aaccaaac MYB
MYB3 binding site motif 16616880 16616887 taactaac MYB
MYB4 binding site motif 16616881 16616887 aactaac MYB
MYB4 binding site motif 16616906 16616912 accaaac MYB
MYB4 binding site motif 16619241 16619247 accaaac MYB
MYB4 binding site motif 16617373 16617379 aacaaac MYB
RAV1-A binding site motif 16617819 16617823 caaca ABI3VP1
RAV1-A binding site motif 16618562 16618566 caaca ABI3VP1
RAV1-A binding site motif 16618991 16618995 caaca ABI3VP1
RAV1-A binding site motif 16618379 16618383 caaca ABI3VP1
RAV1-A binding site motif 16618324 16618328 caaca ABI3VP1
RAV1-A binding site motif 16617560 16617564 caaca ABI3VP1
RAV1-A binding site motif 16617050 16617054 caaca ABI3VP1
RAV1-A binding site motif 16616922 16616926 caaca ABI3VP1
LFY consensus binding site motif 16616660 16616665 ccattg LFY
LFY consensus binding site motif 16618212 16618217 ccaatg LFY
LFY consensus binding site motif 16618491 16618496 ccattg LFY
LFY consensus binding site motif 16618212 16618217 ccattg LFY
ABRE-like binding site motif 16617999 16618006 tacgtgga ...
BoxII promoter motif 16616645 16616650 ggttaa ...
BoxII promoter motif 16618271 16618276 ggttaa ...
BoxII promoter motif 16616671 16616676 ggttaa ...
GATA promoter motif [LRE] 16616705 16616710 agataa ...
GATA promoter motif [LRE] 16616959 16616964 tgatag ...
GATA promoter motif [LRE] 16617140 16617145 tgataa ...
GATA promoter motif [LRE] 16617602 16617607 tgataa ...
GATA promoter motif [LRE] 16617892 16617897 tgatag ...
GATA promoter motif [LRE] 16617933 16617938 tgatag ...
GATA promoter motif [LRE] 16618042 16618047 tgataa ...
GATA promoter motif [LRE] 16618059 16618064 agataa ...
GATA promoter motif [LRE] 16618080 16618085 tgatag ...
GATA promoter motif [LRE] 16618865 16618870 agatag ...
GATA promoter motif [LRE] 16619335 16619340 tgatag ...
GATA promoter motif [LRE] 16618811 16618816 agataa ...
GATA promoter motif [LRE] 16616846 16616851 tgataa ...
Ibox promoter motif 16618005 16618010 gataag ...
TELO-box promoter motif 16617837 16617845 aaaccctaa ...
SORLIP1 16619402 16619407 agccac ...
SORLIP1 16617937 16617942 agccac ...

Copyright © 2012. All rights reserved. Credits