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Summary of properties of promoter region AT1G52150


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G52150 HD-Zip transcription factor Chr1:19480207 - 19482492 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G52150

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 19480368 19480373 cacatg BHLH
AtMYC2 BS in RD22 19481893 19481898 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 19480655 19480662 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 19481791 19481798 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 19481389 19481396 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 19481259 19481266 aaattaaa Homeobox
W-box promoter motif 19480405 19480410 ttgact WRKY
W-box promoter motif 19482121 19482126 ttgact WRKY
ARF1 binding site motif 19480914 19480919 tgtctc ARF
ARF1 binding site motif 19480558 19480563 tgtctc ARF
CCA1 binding site motif 19481510 19481517 aaaaatct MYB-related
CCA1 binding site motif 19480594 19480601 aacaatct MYB-related
DPBF1&2 binding site motif 19481892 19481898 acacatg bZIP
DPBF1&2 binding site motif 19481272 19481278 acacttg bZIP
MYB4 binding site motif 19481809 19481815 aacaaac MYB
MYB4 binding site motif 19480946 19480952 aactacc MYB
RAV1-A binding site motif 19480280 19480284 caaca ABI3VP1
RAV1-A binding site motif 19480488 19480492 caaca ABI3VP1
RAV1-A binding site motif 19482315 19482319 caaca ABI3VP1
RAV1-A binding site motif 19482440 19482444 caaca ABI3VP1
RAV1-A binding site motif 19482044 19482048 caaca ABI3VP1
LFY consensus binding site motif 19480217 19480222 ccaatg LFY
LFY consensus binding site motif 19481458 19481463 ccaatg LFY
LFY consensus binding site motif 19481681 19481686 ccactg LFY
LFY consensus binding site motif 19481727 19481732 ccactg LFY
LFY consensus binding site motif 19481748 19481753 ccattg LFY
LFY consensus binding site motif 19482028 19482033 ccattg LFY
LFY consensus binding site motif 19481458 19481463 ccattg LFY
LFY consensus binding site motif 19480941 19480946 ccactg LFY
ARF binding site motif 19480914 19480919 tgtctc ...
ARF binding site motif 19480558 19480563 tgtctc ...
GATA promoter motif [LRE] 19481609 19481614 agataa ...
GATA promoter motif [LRE] 19482456 19482461 tgatag ...
GATA promoter motif [LRE] 19482414 19482419 tgataa ...
GATA promoter motif [LRE] 19481868 19481873 tgataa ...
GATA promoter motif [LRE] 19481052 19481057 tgataa ...
GATA promoter motif [LRE] 19481022 19481027 agataa ...
GATA promoter motif [LRE] 19480273 19480278 tgatag ...
T-box promoter motif 19481158 19481163 actttg ...
TELO-box promoter motif 19480513 19480521 aaaccctaa ...
SORLIP1 19481722 19481727 agccac ...
SORLIP1 19481734 19481739 agccac ...
SORLIP2 19481173 19481177 gggcc ...

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