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Summary of properties of promoter region AT1G53160


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G53160 transcription factor Chr1:19868948 - 19871948 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G53160

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 19868970 19868975 cacatg BHLH
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 19869578 19869583 actcat bZIP
W-box promoter motif 19869251 19869256 ttgact WRKY
W-box promoter motif 19870168 19870173 ttgact WRKY
CArG promoter motif 19871379 19871388 ccaattaagg MADS
CArG promoter motif 19871378 19871387 ccttaattgg MADS
ATHB2 binding site motif 19871289 19871297 taatcatta HB
DPBF1&2 binding site motif 19868983 19868989 acaccag bZIP
DPBF1&2 binding site motif 19871884 19871890 acacttg bZIP
DPBF1&2 binding site motif 19869457 19869463 acacttg bZIP
MYB binding site promoter 19871162 19871169 aaccaaac MYB
MYB4 binding site motif 19869865 19869871 aactaac MYB
MYB4 binding site motif 19870346 19870352 accaaac MYB
MYB4 binding site motif 19871162 19871168 accaaac MYB
MYB4 binding site motif 19870117 19870123 aactacc MYB
MYB4 binding site motif 19869674 19869680 aacaacc MYB
MYB4 binding site motif 19869018 19869024 aacaaac MYB
RAV1-A binding site motif 19869190 19869194 caaca ABI3VP1
RAV1-A binding site motif 19869303 19869307 caaca ABI3VP1
RAV1-A binding site motif 19869342 19869346 caaca ABI3VP1
RAV1-A binding site motif 19869965 19869969 caaca ABI3VP1
RAV1-A binding site motif 19870063 19870067 caaca ABI3VP1
RAV1-A binding site motif 19870174 19870178 caaca ABI3VP1
RAV1-A binding site motif 19870368 19870372 caaca ABI3VP1
RAV1-A binding site motif 19870754 19870758 caaca ABI3VP1
RAV1-A binding site motif 19871526 19871530 caaca ABI3VP1
RAV1-A binding site motif 19871460 19871464 caaca ABI3VP1
RAV1-A binding site motif 19871420 19871424 caaca ABI3VP1
RAV1-A binding site motif 19871213 19871217 caaca ABI3VP1
RAV1-A binding site motif 19869126 19869130 caaca ABI3VP1
RAV1-B binding site motif 19869603 19869608 cacctg ABI3VP1
LFY consensus binding site motif 19871006 19871011 ccattg LFY
LFY consensus binding site motif 19869758 19869763 ccactg LFY
LFY consensus binding site motif 19869371 19869376 ccattg LFY
BoxII promoter motif 19869557 19869562 ggttaa ...
BoxII promoter motif 19870469 19870474 ggttaa ...
GATA promoter motif [LRE] 19869102 19869107 tgataa ...
GATA promoter motif [LRE] 19869336 19869341 tgatag ...
GATA promoter motif [LRE] 19870018 19870023 tgatag ...
GATA promoter motif [LRE] 19870372 19870377 agatag ...
GATA promoter motif [LRE] 19870877 19870882 agatag ...
GATA promoter motif [LRE] 19871240 19871245 agataa ...
GATA promoter motif [LRE] 19871842 19871847 agataa ...
GATA promoter motif [LRE] 19871667 19871672 agataa ...
GATA promoter motif [LRE] 19871543 19871548 agatag ...
GATA promoter motif [LRE] 19871169 19871174 tgataa ...
GATA promoter motif [LRE] 19870786 19870791 tgataa ...
GATA promoter motif [LRE] 19870143 19870148 agatag ...
Ibox promoter motif 19870034 19870039 gataag ...
Ibox promoter motif 19870817 19870822 gataag ...
Ibox promoter motif 19871666 19871671 gataag ...
RY-repeat promoter motif 19871905 19871912 catgcatg ...
RY-repeat promoter motif 19871904 19871911 catgcatg ...
T-box promoter motif 19871434 19871439 actttg ...
Z-box promoter motif 19869839 19869846 atacgtgt ...
SORLIP1 19869791 19869796 agccac ...
SORLIP1 19870677 19870682 agccac ...
SORLIP1 19868973 19868978 agccac ...
SORLIP2 19870050 19870054 gggcc ...
SORLIP2 19870127 19870131 gggcc ...

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