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Summary of properties of promoter region AT1G53230


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G53230 flower development protein cycloidea (cyc3) Chr1:19917253 - 19919911 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G53230

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 19917856 19917862 ctaacca MYB
AtMYC2 BS in RD22 19918167 19918172 cacatg BHLH
W-box promoter motif 19917513 19917518 ttgact WRKY
W-box promoter motif 19917665 19917670 ttgact WRKY
W-box promoter motif 19918238 19918243 ttgact WRKY
W-box promoter motif 19919647 19919652 ttgact WRKY
W-box promoter motif 19919447 19919452 ttgact WRKY
CArG promoter motif 19918707 19918716 ccttttttgg MADS
CArG promoter motif 19918706 19918715 ccaaaaaagg MADS
ARF1 binding site motif 19918757 19918762 tgtctc ARF
ARF1 binding site motif 19919592 19919597 tgtctc ARF
ARF1 binding site motif 19917918 19917923 tgtctc ARF
DPBF1&2 binding site motif 19918338 19918344 acacaag bZIP
DPBF1&2 binding site motif 19919567 19919573 acacttg bZIP
DPBF1&2 binding site motif 19919539 19919545 acaccgg bZIP
DPBF1&2 binding site motif 19918882 19918888 acacccg bZIP
DPBF1&2 binding site motif 19918167 19918173 acacatg bZIP
DPBF1&2 binding site motif 19917932 19917938 acacaag bZIP
MYB binding site promoter 19917853 19917860 aaccaaac MYB
MYB binding site promoter 19917556 19917563 aaccaacc MYB
MYB4 binding site motif 19918133 19918139 aacaaac MYB
MYB4 binding site motif 19918834 19918840 aacaaac MYB
MYB4 binding site motif 19918814 19918820 aacaacc MYB
MYB4 binding site motif 19918210 19918216 aacaaac MYB
MYB4 binding site motif 19918107 19918113 aactacc MYB
MYB4 binding site motif 19917853 19917859 accaaac MYB
MYB4 binding site motif 19917676 19917682 aacaaac MYB
MYB4 binding site motif 19917556 19917562 accaacc MYB
RAV1-A binding site motif 19917407 19917411 caaca ABI3VP1
RAV1-A binding site motif 19919417 19919421 caaca ABI3VP1
RAV1-A binding site motif 19918886 19918890 caaca ABI3VP1
RAV1-A binding site motif 19918817 19918821 caaca ABI3VP1
RAV1-A binding site motif 19918753 19918757 caaca ABI3VP1
RAV1-A binding site motif 19918487 19918491 caaca ABI3VP1
RAV1-A binding site motif 19917883 19917887 caaca ABI3VP1
LFY consensus binding site motif 19917289 19917294 ccattg LFY
LFY consensus binding site motif 19918810 19918815 ccaatg LFY
LFY consensus binding site motif 19919597 19919602 ccaatg LFY
LFY consensus binding site motif 19918810 19918815 ccattg LFY
LFY consensus binding site motif 19917289 19917294 ccaatg LFY
ARF binding site motif 19918757 19918762 tgtctc ...
ARF binding site motif 19919592 19919597 tgtctc ...
ARF binding site motif 19917918 19917923 tgtctc ...
BoxII promoter motif 19918003 19918008 ggttaa ...
BoxII promoter motif 19919356 19919361 ggttaa ...
GATA promoter motif [LRE] 19917622 19917627 agataa ...
GATA promoter motif [LRE] 19918557 19918562 tgataa ...
GATA promoter motif [LRE] 19918913 19918918 agataa ...
GATA promoter motif [LRE] 19919103 19919108 agataa ...
GATA promoter motif [LRE] 19919243 19919248 agataa ...
GATA promoter motif [LRE] 19919685 19919690 agatag ...
GATA promoter motif [LRE] 19919741 19919746 agataa ...
GATA promoter motif [LRE] 19919432 19919437 agataa ...
GATA promoter motif [LRE] 19919400 19919405 agatag ...
GATA promoter motif [LRE] 19917750 19917755 tgataa ...
Ibox promoter motif 19919431 19919436 gataag ...
L1-box promoter motif 19917950 19917957 taaatgta ...
T-box promoter motif 19918518 19918523 actttg ...
T-box promoter motif 19919131 19919136 actttg ...
T-box promoter motif 19919373 19919378 actttg ...
T-box promoter motif 19919588 19919593 actttg ...
T-box promoter motif 19918564 19918569 actttg ...
TELO-box promoter motif 19918061 19918069 aaaccctaa ...
SORLREP3 19918446 19918454 tgtatatat ...
SORLIP2 19917278 19917282 gggcc ...
SORLIP2 19918601 19918605 gggcc ...

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