AGRIS logo
Home AtcisDB AtTFDB Regulatory
Network
People Downloads External Resources Publications

Summary of properties of promoter region AT1G63290


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G63290 D-ribulose-5-phosphate-3-epimerase Chr1:23539164 - 23542117 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G63290

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 23541992 23541998 ctaacca MYB
AtMYC2 BS in RD22 23539831 23539836 cacatg BHLH
AtMYC2 BS in RD22 23539456 23539461 cacatg BHLH
Bellringer/replumless/pennywise BS2 IN AG 23539657 23539664 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 23539656 23539663 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 23541043 23541048 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 23541634 23541639 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 23539887 23539892 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 23539482 23539487 actcat bZIP
W-box promoter motif 23539447 23539452 ttgact WRKY
W-box promoter motif 23539524 23539529 ttgact WRKY
W-box promoter motif 23539730 23539735 ttgact WRKY
W-box promoter motif 23540737 23540742 ttgact WRKY
W-box promoter motif 23540767 23540772 ttgact WRKY
W-box promoter motif 23541444 23541449 ttgacc WRKY
W-box promoter motif 23542041 23542046 ttgact WRKY
W-box promoter motif 23541211 23541216 ttgact WRKY
W-box promoter motif 23539652 23539657 ttgacc WRKY
W-box promoter motif 23539509 23539514 ttgact WRKY
ARF1 binding site motif 23540241 23540246 tgtctc ARF
ARF1 binding site motif 23541336 23541341 tgtctc ARF
DPBF1&2 binding site motif 23539593 23539599 acacgag bZIP
DPBF1&2 binding site motif 23540622 23540628 acacctg bZIP
DPBF1&2 binding site motif 23542111 23542117 acacaag bZIP
DPBF1&2 binding site motif 23541400 23541406 acacttg bZIP
DPBF1&2 binding site motif 23539456 23539462 acacatg bZIP
HSEs binding site motif 23541304 23541313 agaagattct HSF
HSEs binding site motif 23541303 23541312 agaatcttct HSF
MYB binding site promoter 23540106 23540113 aaccaaac MYB
MYB binding site promoter 23541737 23541744 caccaaac MYB
MYB binding site promoter 23541104 23541111 aaccaaac MYB
MYB4 binding site motif 23540107 23540113 accaaac MYB
MYB4 binding site motif 23541738 23541744 accaaac MYB
MYB4 binding site motif 23541990 23541996 aactaac MYB
MYB4 binding site motif 23541104 23541110 accaaac MYB
MYB4 binding site motif 23540488 23540494 aacaacc MYB
MYB4 binding site motif 23540365 23540371 accaaac MYB
MYB4 binding site motif 23539704 23539710 acctaac MYB
MYB4 binding site motif 23539433 23539439 acctaac MYB
RAV1-A binding site motif 23539423 23539427 caaca ABI3VP1
RAV1-A binding site motif 23539694 23539698 caaca ABI3VP1
RAV1-A binding site motif 23540045 23540049 caaca ABI3VP1
RAV1-A binding site motif 23541274 23541278 caaca ABI3VP1
RAV1-A binding site motif 23541458 23541462 caaca ABI3VP1
RAV1-A binding site motif 23541779 23541783 caaca ABI3VP1
RAV1-A binding site motif 23541787 23541791 caaca ABI3VP1
RAV1-A binding site motif 23542007 23542011 caaca ABI3VP1
RAV1-A binding site motif 23542109 23542113 caaca ABI3VP1
RAV1-A binding site motif 23541861 23541865 caaca ABI3VP1
RAV1-A binding site motif 23541826 23541830 caaca ABI3VP1
RAV1-A binding site motif 23541658 23541662 caaca ABI3VP1
RAV1-A binding site motif 23540898 23540902 caaca ABI3VP1
RAV1-A binding site motif 23540484 23540488 caaca ABI3VP1
RAV1-A binding site motif 23539842 23539846 caaca ABI3VP1
RAV1-A binding site motif 23539745 23539749 caaca ABI3VP1
RAV1-A binding site motif 23539677 23539681 caaca ABI3VP1
RAV1-A binding site motif 23539392 23539396 caaca ABI3VP1
RAV1-A binding site motif 23539305 23539309 caaca ABI3VP1
RAV1-A binding site motif 23539291 23539295 caaca ABI3VP1
RAV1-B binding site motif 23540623 23540628 cacctg ABI3VP1
LFY consensus binding site motif 23541480 23541485 ccattg LFY
LFY consensus binding site motif 23541906 23541911 ccactg LFY
LFY consensus binding site motif 23540003 23540008 ccagtg LFY
ARF binding site motif 23540241 23540246 tgtctc ...
ARF binding site motif 23541336 23541341 tgtctc ...
DRE-like promoter motif 23540596 23540604 agccgacca ...
GATA promoter motif [LRE] 23539751 23539756 agataa ...
GATA promoter motif [LRE] 23541150 23541155 agataa ...
GATA promoter motif [LRE] 23541356 23541361 agatag ...
GATA promoter motif [LRE] 23541384 23541389 agatag ...
GATA promoter motif [LRE] 23542091 23542096 agataa ...
GATA promoter motif [LRE] 23541848 23541853 agataa ...
GATA promoter motif [LRE] 23541165 23541170 agataa ...
GATA promoter motif [LRE] 23540189 23540194 agataa ...
GATA promoter motif [LRE] 23539875 23539880 tgatag ...
Hexamer promoter motif 23540652 23540657 ccgtcg ...
Ibox promoter motif 23539752 23539757 gataag ...
Ibox promoter motif 23540292 23540297 gataag ...
Ibox promoter motif 23540188 23540193 gataag ...
T-box promoter motif 23542027 23542032 actttg ...
T-box promoter motif 23541697 23541702 actttg ...
T-box promoter motif 23541472 23541477 actttg ...
T-box promoter motif 23540538 23540543 actttg ...
SORLIP1 23540507 23540512 agccac ...
SORLIP2 23540703 23540707 gggcc ...

Copyright © 2012. All rights reserved. Credits