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Summary of properties of promoter region AT1G80940


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT1G80940 expressed protein Chr1:30401812 - 30403040 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT1G80940

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 30403028 30403033 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 30402436 30402441 actcat bZIP
W-box promoter motif 30402796 30402801 ttgact WRKY
W-box promoter motif 30401888 30401893 ttgacc WRKY
CArG promoter motif 30401961 30401970 cctaaatagg MADS
CArG promoter motif 30401960 30401969 cctatttagg MADS
MYB4 binding site motif 30402664 30402670 aacaaac MYB
MYB4 binding site motif 30402650 30402656 accaaac MYB
MYB4 binding site motif 30402499 30402505 aacaaac MYB
RAV1-A binding site motif 30402974 30402978 caaca ABI3VP1
RAV1-A binding site motif 30402646 30402650 caaca ABI3VP1
LFY consensus binding site motif 30402551 30402556 ccattg LFY
LFY consensus binding site motif 30402170 30402175 ccactg LFY
BoxII promoter motif 30402556 30402561 ggttaa ...
GATA promoter motif [LRE] 30401907 30401912 agataa ...
GATA promoter motif [LRE] 30402022 30402027 tgataa ...
GATA promoter motif [LRE] 30402429 30402434 tgataa ...
GATA promoter motif [LRE] 30402716 30402721 tgataa ...
GATA promoter motif [LRE] 30402208 30402213 agataa ...
Ibox promoter motif 30402759 30402764 gataag ...
Ibox promoter motif 30402944 30402949 gataag ...
T-box promoter motif 30401936 30401941 actttg ...
SORLIP2 30401958 30401962 gggcc ...
SORLIP2 30401969 30401973 gggcc ...
SORLIP2 30401969 30401973 gggcc ...
SORLIP5 30401817 30401823 gagtgag ...

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