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Summary of properties of promoter region AT2G04540


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT2G04540 3-oxoacyl carrier protein synthase Chr2:1584683 - 1587685 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT2G04540

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 1586446 1586451 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 1584868 1584875 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 1585047 1585054 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1587234 1587239 actcat bZIP
W-box promoter motif 1586336 1586341 ttgact WRKY
W-box promoter motif 1586434 1586439 ttgacc WRKY
W-box promoter motif 1587527 1587532 ttgact WRKY
W-box promoter motif 1586834 1586839 ttgacc WRKY
ARF1 binding site motif 1585277 1585282 tgtctc ARF
ARF1 binding site motif 1587164 1587169 tgtctc ARF
ARF1 binding site motif 1585947 1585952 tgtctc ARF
CCA1 binding site motif 1585856 1585863 aaaaatct MYB-related
DPBF1&2 binding site motif 1586198 1586204 acactag bZIP
DPBF1&2 binding site motif 1586347 1586353 acacgcg bZIP
DPBF1&2 binding site motif 1587329 1587335 acacccg bZIP
DPBF1&2 binding site motif 1587159 1587165 acacccg bZIP
MYB binding site promoter 1585988 1585995 cacctaac MYB
MYB1 binding site motif 1584949 1584956 ctccaacc MYB
MYB4 binding site motif 1585789 1585795 accaacc MYB
MYB4 binding site motif 1585823 1585829 aacaaac MYB
MYB4 binding site motif 1586213 1586219 aacaaac MYB
MYB4 binding site motif 1585988 1585994 acctaac MYB
RAV1-A binding site motif 1585576 1585580 caaca ABI3VP1
RAV1-A binding site motif 1585806 1585810 caaca ABI3VP1
RAV1-A binding site motif 1585952 1585956 caaca ABI3VP1
RAV1-A binding site motif 1586048 1586052 caaca ABI3VP1
RAV1-A binding site motif 1586161 1586165 caaca ABI3VP1
RAV1-A binding site motif 1586264 1586268 caaca ABI3VP1
RAV1-A binding site motif 1586288 1586292 caaca ABI3VP1
RAV1-A binding site motif 1587515 1587519 caaca ABI3VP1
RAV1-A binding site motif 1584786 1584790 caaca ABI3VP1
RAV1-A binding site motif 1584738 1584742 caaca ABI3VP1
LFY consensus binding site motif 1586772 1586777 ccaatg LFY
LFY consensus binding site motif 1587109 1587114 ccaatg LFY
LFY consensus binding site motif 1587512 1587517 ccattg LFY
LFY consensus binding site motif 1587640 1587645 ccattg LFY
LFY consensus binding site motif 1587640 1587645 ccaatg LFY
LFY consensus binding site motif 1586829 1586834 ccaatg LFY
ARF binding site motif 1585277 1585282 tgtctc ...
ARF binding site motif 1587164 1587169 tgtctc ...
ARF binding site motif 1585947 1585952 tgtctc ...
BoxII promoter motif 1586636 1586641 ggttaa ...
BoxII promoter motif 1587364 1587369 ggttaa ...
BoxII promoter motif 1587575 1587580 ggttaa ...
BoxII promoter motif 1587623 1587628 ggttaa ...
BoxII promoter motif 1587645 1587650 ggttaa ...
BoxII promoter motif 1587612 1587617 ggttaa ...
GATA promoter motif [LRE] 1585032 1585037 tgataa ...
GATA promoter motif [LRE] 1585735 1585740 tgataa ...
Ibox promoter motif 1585033 1585038 gataag ...
Ibox promoter motif 1585734 1585739 gataag ...
LTRE promoter motif 1587325 1587331 accgaca ...
SORLIP2 1586222 1586226 gggcc ...
SORLIP5 1587166 1587172 gagtgag ...

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