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Summary of properties of promoter region AT2G22340


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT2G22340 hypothetical protein Chr2:9501034 - 9502113 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT2G22340

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
CBF1 BS in cor15a 9502033 9502040 tggccgac ...
Bellringer/replumless/pennywise BS1 IN AG 9501645 9501652 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 9501602 9501609 aaattaaa Homeobox
W-box promoter motif 9501418 9501423 ttgact WRKY
CCA1 binding site motif 9501784 9501791 aacaatct MYB-related
DPBF1&2 binding site motif 9501901 9501907 acacgtg bZIP
DPBF1&2 binding site motif 9501911 9501917 acacttg bZIP
MYB4 binding site motif 9501132 9501138 aacaacc MYB
RAV1-A binding site motif 9501181 9501185 caaca ABI3VP1
RAV1-A binding site motif 9501890 9501894 caaca ABI3VP1
RAV1-A binding site motif 9501433 9501437 caaca ABI3VP1
RAV1-A binding site motif 9501135 9501139 caaca ABI3VP1
LFY consensus binding site motif 9501116 9501121 ccaatg LFY
LFY consensus binding site motif 9502039 9502044 ccattg LFY
LFY consensus binding site motif 9501116 9501121 ccattg LFY
LFY consensus binding site motif 9501084 9501089 ccaatg LFY
GATA promoter motif [LRE] 9501355 9501360 agatag ...
GATA promoter motif [LRE] 9501457 9501462 agatag ...
GATA promoter motif [LRE] 9501592 9501597 tgataa ...
GATA promoter motif [LRE] 9501811 9501816 tgataa ...
GATA promoter motif [LRE] 9501035 9501040 agataa ...
G-box promoter motif [LRE] 9501902 9501907 cacgtg ...
G-box promoter motif [LRE] 9501901 9501906 cacgtg ...
Hexamer promoter motif 9501128 9501133 ccgtcg ...
L1-box promoter motif 9501676 9501683 taaatgca ...

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