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Summary of properties of promoter region AT2G46430

Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT2G46430 cyclic nucleotide-regulated ion channel (CNGC3) Chr2:19063901 - 19065366 Get Sequence Predicted TAIR ...

Current list of binding sites and references

Binding Sites in upstream region of AT2G46430

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 19064487 19064493 ctaacca MYB
AtMYC2 BS in RD22 19065056 19065061 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 19064877 19064884 aaattaaa Homeobox
W-box promoter motif 19064975 19064980 ttgact WRKY
W-box promoter motif 19064998 19065003 ttgact WRKY
DPBF1&2 binding site motif 19065056 19065062 acacatg bZIP
DPBF1&2 binding site motif 19064608 19064614 acacttg bZIP
MYB binding site promoter 19064499 19064506 caccaaac MYB
MYB4 binding site motif 19064500 19064506 accaaac MYB
MYB4 binding site motif 19064729 19064735 aacaaac MYB
MYB4 binding site motif 19064082 19064088 aacaaac MYB
RAV1-A binding site motif 19064813 19064817 caaca ABI3VP1
RAV1-A binding site motif 19064850 19064854 caaca ABI3VP1
RAV1-A binding site motif 19064886 19064890 caaca ABI3VP1
RAV1-A binding site motif 19064155 19064159 caaca ABI3VP1
LFY consensus binding site motif 19065319 19065324 ccattg LFY
GATA promoter motif [LRE] 19065142 19065147 agataa ...
GATA promoter motif [LRE] 19063940 19063945 agataa ...
T-box promoter motif 19064112 19064117 actttg ...
T-box promoter motif 19065348 19065353 actttg ...
T-box promoter motif 19065099 19065104 actttg ...

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