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Summary of properties of promoter region AT2G47030


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT2G47030 pectinesterase family Chr2:19333465 - 19335254 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT2G47030

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 19334787 19334793 ctaacca MYB
Bellringer/replumless/pennywise BS1 IN AG 19334654 19334661 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 19333911 19333918 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 19335194 19335201 aaattagt Homeobox
Bellringer/replumless/pennywise BS2 IN AG 19333742 19333749 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 19333743 19333750 actaattt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 19335195 19335202 actaattt Homeobox
W-box promoter motif 19335127 19335132 ttgacc WRKY
W-box promoter motif 19335152 19335157 ttgacc WRKY
CArG promoter motif 19334924 19334933 ccatatttgg MADS
CArG promoter motif 19334923 19334932 ccaaatatgg MADS
ARF1 binding site motif 19333602 19333607 tgtctc ARF
ARF1 binding site motif 19333845 19333850 tgtctc ARF
CCA1 binding site motif 19334136 19334143 aaaaatct MYB-related
MYB4 binding site motif 19334785 19334791 aactaac MYB
RAV1-A binding site motif 19334039 19334043 caaca ABI3VP1
RAV1-A binding site motif 19334070 19334074 caaca ABI3VP1
RAV1-A binding site motif 19334104 19334108 caaca ABI3VP1
RAV1-A binding site motif 19333759 19333763 caaca ABI3VP1
RAV1-A binding site motif 19333698 19333702 caaca ABI3VP1
RAV1-A binding site motif 19333647 19333651 caaca ABI3VP1
RAV1-B binding site motif 19334941 19334946 cacctg ABI3VP1
LFY consensus binding site motif 19334791 19334796 ccattg LFY
LFY consensus binding site motif 19334072 19334077 ccactg LFY
ARF binding site motif 19333602 19333607 tgtctc ...
ARF binding site motif 19333845 19333850 tgtctc ...
BoxII promoter motif 19334919 19334924 ggttaa ...
EveningElement promoter motif 19334672 19334680 aaaatatct ...
GATA promoter motif [LRE] 19334521 19334526 tgataa ...
GATA promoter motif [LRE] 19334809 19334814 tgataa ...
GATA promoter motif [LRE] 19334901 19334906 agataa ...
GATA promoter motif [LRE] 19334712 19334717 agataa ...
GATA promoter motif [LRE] 19334635 19334640 tgataa ...
T-box promoter motif 19333841 19333846 actttg ...

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