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Summary of properties of promoter region AT3G02840


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G02840 expressed protein Chr3:615921 - 618415 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G02840

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 617786 617791 cacatg BHLH
AtMYC2 BS in RD22 616166 616171 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 616312 616319 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 617707 617714 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 617708 617715 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 616245 616250 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 617777 617782 actcat bZIP
W-box promoter motif 616162 616167 ttgacc WRKY
W-box promoter motif 618295 618300 ttgacc WRKY
W-box promoter motif 618212 618217 ttgacc WRKY
ARF1 binding site motif 618302 618307 tgtctc ARF
DPBF1&2 binding site motif 618036 618042 acacgcg bZIP
DPBF1&2 binding site motif 616742 616748 acaccag bZIP
MYB4 binding site motif 616269 616275 acctacc MYB
MYB4 binding site motif 617607 617613 aacaaac MYB
MYB4 binding site motif 616704 616710 aactaac MYB
RAV1-A binding site motif 618216 618220 caaca ABI3VP1
RAV1-A binding site motif 617181 617185 caaca ABI3VP1
RAV1-A binding site motif 616479 616483 caaca ABI3VP1
RAV1-A binding site motif 616095 616099 caaca ABI3VP1
LFY consensus binding site motif 616092 616097 ccattg LFY
LFY consensus binding site motif 617015 617020 ccattg LFY
LFY consensus binding site motif 616455 616460 ccactg LFY
LFY consensus binding site motif 616172 616177 ccaatg LFY
ARF binding site motif 618302 618307 tgtctc ...
BoxII promoter motif 618152 618157 ggttaa ...
GATA promoter motif [LRE] 616518 616523 agatag ...
GATA promoter motif [LRE] 617266 617271 agatag ...
GATA promoter motif [LRE] 617685 617690 tgataa ...
GATA promoter motif [LRE] 617504 617509 agataa ...
GATA promoter motif [LRE] 617466 617471 tgataa ...
GATA promoter motif [LRE] 617320 617325 agatag ...
GATA promoter motif [LRE] 616657 616662 agataa ...
Hexamer promoter motif 618157 618162 ccgtcg ...
Hexamer promoter motif 617623 617628 ccgtcg ...
Ibox promoter motif 617629 617634 gataag ...
T-box promoter motif 616399 616404 actttg ...
TELO-box promoter motif 616439 616447 aaaccctaa ...
SORLREP3 618052 618060 tgtatatat ...

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