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Summary of properties of promoter region AT3G04090


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G04090 hypothetical protein Chr3:1074101 - 1075205 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G04090

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 1075193 1075199 ctaacca MYB
AtMYC2 BS in RD22 1074862 1074867 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 1074757 1074764 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 1074168 1074175 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 1074169 1074176 actaattt Homeobox
W-box promoter motif 1074166 1074171 ttgact WRKY
W-box promoter motif 1074197 1074202 ttgact WRKY
W-box promoter motif 1074296 1074301 ttgacc WRKY
W-box promoter motif 1074608 1074613 ttgact WRKY
W-box promoter motif 1074672 1074677 ttgact WRKY
W-box promoter motif 1074722 1074727 ttgact WRKY
W-box promoter motif 1074240 1074245 ttgact WRKY
ARF1 binding site motif 1074126 1074131 tgtctc ARF
ATHB2 binding site motif 1074945 1074953 taataatta HB
CCA1 binding site motif 1075128 1075135 aaaaatct MYB-related
DPBF1&2 binding site motif 1074861 1074867 acacatg bZIP
DPBF1&2 binding site motif 1074279 1074285 acaccag bZIP
MYB binding site promoter 1075190 1075197 cacctaac MYB
MYB binding site promoter 1075050 1075057 aacctaac MYB
MYB4 binding site motif 1075191 1075197 acctaac MYB
MYB4 binding site motif 1075050 1075056 acctaac MYB
RAV1-A binding site motif 1075025 1075029 caaca ABI3VP1
RAV1-A binding site motif 1074194 1074198 caaca ABI3VP1
ABRE-like binding site motif 1074977 1074984 tacgtgga ...
ARF binding site motif 1074126 1074131 tgtctc ...
BoxII promoter motif 1074768 1074773 ggttaa ...
BoxII promoter motif 1075055 1075060 ggttaa ...
GATA promoter motif [LRE] 1074107 1074112 agatag ...
GATA promoter motif [LRE] 1074517 1074522 tgatag ...
GATA promoter motif [LRE] 1074504 1074509 agataa ...
T-box promoter motif 1074117 1074122 actttg ...

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