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Summary of properties of promoter region AT3G04550


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G04550 expressed protein Chr3:1223718 - 1225927 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G04550

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 1225482 1225487 cacatg BHLH
AtMYC2 BS in RD22 1225144 1225149 cacatg BHLH
AtMYC2 BS in RD22 1224757 1224762 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 1225493 1225500 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1225484 1225489 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1223749 1223754 actcat bZIP
W-box promoter motif 1225383 1225388 ttgact WRKY
W-box promoter motif 1225738 1225743 ttgact WRKY
W-box promoter motif 1224631 1224636 ttgacc WRKY
W-box promoter motif 1224462 1224467 ttgact WRKY
ATHB6 binding site motif 1223904 1223912 caattatta HB
CCA1 binding site motif 1224721 1224728 aaaaatct MYB-related
CCA1 binding site motif 1224792 1224799 aaaaatct MYB-related
DPBF1&2 binding site motif 1224022 1224028 acacaag bZIP
MYB binding site promoter 1225177 1225184 aacctacc MYB
MYB binding site promoter 1225877 1225884 aaccaaac MYB
MYB4 binding site motif 1225178 1225184 acctacc MYB
MYB4 binding site motif 1225570 1225576 aacaaac MYB
MYB4 binding site motif 1225877 1225883 accaaac MYB
MYB4 binding site motif 1224096 1224102 acctaac MYB
RAV1-A binding site motif 1224335 1224339 caaca ABI3VP1
RAV1-A binding site motif 1224920 1224924 caaca ABI3VP1
RAV1-A binding site motif 1225322 1225326 caaca ABI3VP1
RAV1-A binding site motif 1225569 1225573 caaca ABI3VP1
RAV1-A binding site motif 1225642 1225646 caaca ABI3VP1
RAV1-A binding site motif 1225380 1225384 caaca ABI3VP1
RAV1-A binding site motif 1225316 1225320 caaca ABI3VP1
RAV1-A binding site motif 1224878 1224882 caaca ABI3VP1
RAV1-A binding site motif 1223762 1223766 caaca ABI3VP1
LFY consensus binding site motif 1224430 1224435 ccattg LFY
LFY consensus binding site motif 1224779 1224784 ccaatg LFY
EveningElement promoter motif 1225795 1225803 aaaatatct ...
GATA promoter motif [LRE] 1223721 1223726 tgatag ...
GATA promoter motif [LRE] 1225193 1225198 tgataa ...
GATA promoter motif [LRE] 1225895 1225900 agataa ...
GATA promoter motif [LRE] 1225470 1225475 tgatag ...
GATA promoter motif [LRE] 1224536 1224541 agatag ...
Ibox promoter motif 1225896 1225901 gataag ...
Ibox promoter motif 1224126 1224131 gataag ...
T-box promoter motif 1225555 1225560 actttg ...
TELO-box promoter motif 1225605 1225613 aaaccctaa ...
SORLIP1 1224680 1224685 agccac ...
SORLIP2 1224533 1224537 gggcc ...
SORLIP2 1224554 1224558 gggcc ...

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