AGRIS logo
Home AtcisDB AtTFDB Regulatory
Network
People Downloads External Resources Publications

Summary of properties of promoter region AT3G05960


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G05960 hexose transporter Chr3:1785339 - 1786322 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G05960

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AG BS in AP3 1786064 1786073 ccatttttag MADS
AP1 BS in AP3 1786064 1786073 ccatttttag MADS
AtMYC2 BS in RD22 1786098 1786103 cacatg BHLH
W-box promoter motif 1785941 1785946 ttgact WRKY
ARF1 binding site motif 1786191 1786196 tgtctc ARF
DPBF1&2 binding site motif 1786026 1786032 acacggg bZIP
MYB binding site promoter 1785876 1785883 aaccaaac MYB
MYB4 binding site motif 1786091 1786097 accaaac MYB
MYB4 binding site motif 1785876 1785882 accaaac MYB
RAV1-A binding site motif 1786160 1786164 caaca ABI3VP1
RAV1-A binding site motif 1785913 1785917 caaca ABI3VP1
ARF binding site motif 1786191 1786196 tgtctc ...
BoxII promoter motif 1785710 1785715 ggttaa ...
BoxII promoter motif 1785855 1785860 ggttaa ...
BoxII promoter motif 1785881 1785886 ggttaa ...
BoxII promoter motif 1785890 1785895 ggttaa ...
BoxII promoter motif 1785882 1785887 ggttaa ...
GATA promoter motif [LRE] 1786119 1786124 tgataa ...

Copyright © 2012. All rights reserved. Credits