AGRIS logo
Home AtcisDB AtTFDB Regulatory
Network
People Downloads External Resources Publications

Summary of properties of promoter region AT3G13380


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G13380 brassinosteroid receptor kinase Chr3:4344242 - 4346563 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G13380

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
Bellringer/replumless/pennywise BS1 IN AG 4344855 4344862 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 4346441 4346448 aaattagt Homeobox
Bellringer/replumless/pennywise BS2 IN AG 4346179 4346186 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 4346180 4346187 actaattt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 4346440 4346447 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 4344716 4344721 actcat bZIP
W-box promoter motif 4345210 4345215 ttgacc WRKY
ATHB2 binding site motif 4346427 4346435 taataatta HB
ATHB2 binding site motif 4346456 4346464 taatcatta HB
ATHB2 binding site motif 4344290 4344298 taataatta HB
DPBF1&2 binding site motif 4345253 4345259 acacttg bZIP
DPBF1&2 binding site motif 4345652 4345658 acacgcg bZIP
HSEs binding site motif 4344679 4344688 agaaaattct HSF
HSEs binding site motif 4344678 4344687 agaattttct HSF
MYB1 binding site motif 4345964 4345971 atcctacc MYB
MYB4 binding site motif 4344740 4344746 acctaac MYB
MYB4 binding site motif 4345166 4345172 acctacc MYB
RAV1-A binding site motif 4344412 4344416 caaca ABI3VP1
RAV1-A binding site motif 4345214 4345218 caaca ABI3VP1
RAV1-A binding site motif 4346069 4346073 caaca ABI3VP1
RAV1-A binding site motif 4346122 4346126 caaca ABI3VP1
RAV1-A binding site motif 4346246 4346250 caaca ABI3VP1
RAV1-A binding site motif 4346270 4346274 caaca ABI3VP1
RAV1-A binding site motif 4346204 4346208 caaca ABI3VP1
RAV1-A binding site motif 4345988 4345992 caaca ABI3VP1
RAV1-A binding site motif 4345194 4345198 caaca ABI3VP1
RAV1-A binding site motif 4345182 4345186 caaca ABI3VP1
RAV1-A binding site motif 4345082 4345086 caaca ABI3VP1
RAV1-A binding site motif 4344306 4344310 caaca ABI3VP1
LFY consensus binding site motif 4344600 4344605 ccaatg LFY
ABRE-like binding site motif 4344480 4344487 tacgtgga ...
BoxII promoter motif 4344613 4344618 ggttaa ...
BoxII promoter motif 4345380 4345385 ggttaa ...
BoxII promoter motif 4344595 4344600 ggttaa ...
GATA promoter motif [LRE] 4344772 4344777 agatag ...
GATA promoter motif [LRE] 4344787 4344792 agataa ...
GATA promoter motif [LRE] 4344827 4344832 agataa ...
GATA promoter motif [LRE] 4345141 4345146 tgataa ...
GATA promoter motif [LRE] 4345571 4345576 agataa ...
GATA promoter motif [LRE] 4345825 4345830 agataa ...
GATA promoter motif [LRE] 4344848 4344853 agataa ...
GATA promoter motif [LRE] 4344686 4344691 agatag ...
GATA promoter motif [LRE] 4344317 4344322 agatag ...
Ibox promoter motif 4344788 4344793 gataag ...
SORLREP3 4344571 4344579 tgtatatat ...
SORLIP2 4345128 4345132 gggcc ...
SORLIP2 4344327 4344331 gggcc ...
SORLIP5 4345812 4345818 gagtgag ...

Copyright © 2012. All rights reserved. Credits