AGRIS logo
Home AtcisDB AtTFDB Regulatory
Network
People Downloads External Resources Publications

Summary of properties of promoter region AT3G13460


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G13460 unknown protein Chr3:4388482 - 4389690 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G13460

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 4388548 4388554 ctaacca MYB
W-box promoter motif 4389424 4389429 ttgacc WRKY
MYB binding site promoter 4389072 4389079 caccaaac MYB
MYB4 binding site motif 4389072 4389078 accaaac MYB
RAV1-A binding site motif 4388511 4388515 caaca ABI3VP1
RAV1-A binding site motif 4388566 4388570 caaca ABI3VP1
RAV1-A binding site motif 4388762 4388766 caaca ABI3VP1
LFY consensus binding site motif 4388883 4388888 ccaatg LFY
GATA promoter motif [LRE] 4388914 4388919 tgataa ...
GATA promoter motif [LRE] 4389272 4389277 agataa ...
Hexamer promoter motif 4388813 4388818 ccgtcg ...
Ibox promoter motif 4388858 4388863 gataag ...
SORLIP1 4388643 4388648 agccac ...
SORLIP2 4389085 4389089 gggcc ...
SORLIP2 4389113 4389117 gggcc ...

Copyright © 2012. All rights reserved. Credits