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Summary of properties of promoter region AT3G18480


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G18480 expressed protein Chr3:6335702 - 6336753 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G18480

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 6336484 6336490 ctaacca MYB
Bellringer/replumless/pennywise BS1 IN AG 6336161 6336168 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 6336141 6336148 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 6335898 6335905 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 6336697 6336702 actcat bZIP
CCA1 binding site motif 6335810 6335817 aaaaatct MYB-related
RAV1-A binding site motif 6336255 6336259 caaca ABI3VP1
RAV1-A binding site motif 6335817 6335821 caaca ABI3VP1
RAV1-A binding site motif 6335752 6335756 caaca ABI3VP1
LFY consensus binding site motif 6336488 6336493 ccagtg LFY
LFY consensus binding site motif 6336640 6336645 ccattg LFY
LFY consensus binding site motif 6336640 6336645 ccaatg LFY
BoxII promoter motif 6335739 6335744 ggttaa ...
GATA promoter motif [LRE] 6335768 6335773 tgataa ...
GATA promoter motif [LRE] 6335807 6335812 agatag ...
GATA promoter motif [LRE] 6336297 6336302 agataa ...
GATA promoter motif [LRE] 6336304 6336309 agataa ...
Ibox promoter motif 6335769 6335774 gataag ...
Ibox promoter motif 6336298 6336303 gataag ...
T-box promoter motif 6335919 6335924 actttg ...
TELO-box promoter motif 6335794 6335802 aaaccctaa ...
SORLREP3 6336120 6336128 tgtatatat ...
SORLIP2 6336613 6336617 gggcc ...

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