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Summary of properties of promoter region AT3G23000


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G23000 SNF1 related protein kinase (ATSRPK1) Chr3:8169657 - 8172603 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G23000

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
Bellringer/replumless/pennywise BS1 IN AG 8170179 8170186 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 8171189 8171196 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 8171041 8171048 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 8169782 8169789 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 8172513 8172520 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 8172514 8172521 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 8170210 8170215 actcat bZIP
W-box promoter motif 8170781 8170786 ttgact WRKY
W-box promoter motif 8172354 8172359 ttgact WRKY
ARF1 binding site motif 8169815 8169820 tgtctc ARF
ARF1 binding site motif 8172582 8172587 tgtctc ARF
ARF1 binding site motif 8171987 8171992 tgtctc ARF
ARF1 binding site motif 8170161 8170166 tgtctc ARF
CCA1 binding site motif 8170928 8170935 aacaatct MYB-related
DPBF1&2 binding site motif 8172218 8172224 acacaag bZIP
DPBF1&2 binding site motif 8171203 8171209 acacttg bZIP
DPBF1&2 binding site motif 8170755 8170761 acactag bZIP
MYB binding site promoter 8172591 8172598 caccaaac MYB
MYB4 binding site motif 8172592 8172598 accaaac MYB
MYB4 binding site motif 8172528 8172534 aactacc MYB
MYB4 binding site motif 8170944 8170950 aactaac MYB
RAV1-A binding site motif 8170014 8170018 caaca ABI3VP1
RAV1-A binding site motif 8170248 8170252 caaca ABI3VP1
RAV1-A binding site motif 8170519 8170523 caaca ABI3VP1
RAV1-A binding site motif 8170577 8170581 caaca ABI3VP1
RAV1-A binding site motif 8171198 8171202 caaca ABI3VP1
RAV1-A binding site motif 8171221 8171225 caaca ABI3VP1
RAV1-A binding site motif 8171588 8171592 caaca ABI3VP1
RAV1-A binding site motif 8172025 8172029 caaca ABI3VP1
RAV1-A binding site motif 8171983 8171987 caaca ABI3VP1
RAV1-A binding site motif 8171939 8171943 caaca ABI3VP1
RAV1-A binding site motif 8171640 8171644 caaca ABI3VP1
RAV1-A binding site motif 8170778 8170782 caaca ABI3VP1
RAV1-B binding site motif 8171093 8171098 cacctg ABI3VP1
LFY consensus binding site motif 8170239 8170244 ccactg LFY
LFY consensus binding site motif 8170775 8170780 ccattg LFY
LFY consensus binding site motif 8170860 8170865 ccaatg LFY
LFY consensus binding site motif 8171805 8171810 ccaatg LFY
LFY consensus binding site motif 8171692 8171697 ccaatg LFY
LFY consensus binding site motif 8170860 8170865 ccattg LFY
LFY consensus binding site motif 8169880 8169885 ccattg LFY
ABRE-like binding site motif 8171136 8171143 tacgtgtc ...
ARF binding site motif 8169815 8169820 tgtctc ...
ARF binding site motif 8172582 8172587 tgtctc ...
ARF binding site motif 8171987 8171992 tgtctc ...
ARF binding site motif 8170161 8170166 tgtctc ...
EveningElement promoter motif 8170563 8170571 aaaatatct ...
GATA promoter motif [LRE] 8169693 8169698 agatag ...
GATA promoter motif [LRE] 8171541 8171546 agataa ...
GATA promoter motif [LRE] 8172295 8172300 tgataa ...
GATA promoter motif [LRE] 8172300 8172305 agataa ...
GATA promoter motif [LRE] 8170457 8170462 agataa ...
GATA promoter motif [LRE] 8170214 8170219 agataa ...
GATA promoter motif [LRE] 8169916 8169921 agatag ...
GATA promoter motif [LRE] 8169895 8169900 agataa ...
GATA promoter motif [LRE] 8169858 8169863 tgataa ...
L1-box promoter motif 8172044 8172051 taaatgta ...
T-box promoter motif 8172135 8172140 actttg ...
Z-box promoter motif 8171137 8171144 atacgtgt ...
SORLREP3 8172097 8172105 tgtatatat ...
SORLIP1 8170961 8170966 agccac ...
SORLIP2 8170865 8170869 gggcc ...
SORLIP2 8170865 8170869 gggcc ...

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