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Summary of properties of promoter region AT3G27080


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G27080 TOM20 Chr3:9987864 - 9990779 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G27080

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 9989833 9989839 ctaacca MYB
AtMYC2 BS in RD22 9989892 9989897 cacatg BHLH
AtMYC2 BS in RD22 9990466 9990471 cacatg BHLH
AtMYC2 BS in RD22 9990383 9990388 cacatg BHLH
AtMYC2 BS in RD22 9989893 9989898 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 9989407 9989414 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 9989915 9989922 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 9989581 9989586 actcat bZIP
W-box promoter motif 9988580 9988585 ttgacc WRKY
W-box promoter motif 9988700 9988705 ttgacc WRKY
W-box promoter motif 9989340 9989345 ttgacc WRKY
W-box promoter motif 9988453 9988458 ttgact WRKY
W-box promoter motif 9988438 9988443 ttgact WRKY
CCA1 binding site motif 9988683 9988690 aaaaatct MYB-related
CCA1 binding site motif 9988089 9988096 aaaaatct MYB-related
DPBF1&2 binding site motif 9987968 9987974 acacgcg bZIP
DPBF1&2 binding site motif 9989356 9989362 acactag bZIP
MYB binding site promoter 9987870 9987877 aaccaacc MYB
MYB1 binding site motif 9987874 9987881 atccaacc MYB
MYB4 binding site motif 9988833 9988839 aacaaac MYB
MYB4 binding site motif 9988651 9988657 aacaaac MYB
MYB4 binding site motif 9987870 9987876 accaacc MYB
RAV1-A binding site motif 9989695 9989699 caaca ABI3VP1
RAV1-A binding site motif 9990352 9990356 caaca ABI3VP1
RAV1-A binding site motif 9989848 9989852 caaca ABI3VP1
RAV1-A binding site motif 9988654 9988658 caaca ABI3VP1
RAV1-B binding site motif 9990473 9990478 cacctg ABI3VP1
LFY consensus binding site motif 9987953 9987958 ccattg LFY
LFY consensus binding site motif 9990722 9990727 ccattg LFY
LFY consensus binding site motif 9989082 9989087 ccaatg LFY
LFY consensus binding site motif 9987866 9987871 ccattg LFY
EveningElement promoter motif 9988660 9988668 aaaatatct ...
GATA promoter motif [LRE] 9988740 9988745 agataa ...
GATA promoter motif [LRE] 9988978 9988983 tgataa ...
GATA promoter motif [LRE] 9989898 9989903 tgataa ...
GATA promoter motif [LRE] 9990569 9990574 tgataa ...
GATA promoter motif [LRE] 9990411 9990416 agataa ...
GATA promoter motif [LRE] 9989176 9989181 tgataa ...
GATA promoter motif [LRE] 9989078 9989083 tgataa ...
GATA promoter motif [LRE] 9988988 9988993 tgataa ...
GATA promoter motif [LRE] 9988594 9988599 agataa ...
GATA promoter motif [LRE] 9987892 9987897 tgataa ...
Ibox promoter motif 9988979 9988984 gataag ...
Ibox promoter motif 9990410 9990415 gataag ...
L1-box promoter motif 9989656 9989663 taaatgca ...
T-box promoter motif 9988526 9988531 actttg ...
T-box promoter motif 9989845 9989850 actttg ...
T-box promoter motif 9988456 9988461 actttg ...
T-box promoter motif 9988426 9988431 actttg ...
T-box promoter motif 9988068 9988073 actttg ...
SORLIP2 9990718 9990722 gggcc ...

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