AGRIS logo
Home AtcisDB AtTFDB Regulatory
Network
People Downloads External Resources Publications

Summary of properties of promoter region AT3G47640


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G47640 hypothetical protein Chr3:17576145 - 17578581 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G47640

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 17578163 17578168 cacatg BHLH
AtMYC2 BS in RD22 17578469 17578474 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 17577404 17577411 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 17577988 17577995 aaattaaa Homeobox
W-box promoter motif 17578028 17578033 ttgact WRKY
W-box promoter motif 17578156 17578161 ttgacc WRKY
W-box promoter motif 17576235 17576240 ttgacc WRKY
ATHB2 binding site motif 17576912 17576920 taataatta HB
ATHB2 binding site motif 17576918 17576926 taataatta HB
ATHB6 binding site motif 17577121 17577129 caattatta HB
CCA1 binding site motif 17577804 17577811 aaaaatct MYB-related
DPBF1&2 binding site motif 17577563 17577569 acactag bZIP
DPBF1&2 binding site motif 17578093 17578099 acacacg bZIP
DPBF1&2 binding site motif 17578481 17578487 acacgtg bZIP
DPBF1&2 binding site motif 17577600 17577606 acactgg bZIP
MYB4 binding site motif 17576447 17576453 aacaaac MYB
MYB4 binding site motif 17578307 17578313 aacaaac MYB
MYB4 binding site motif 17576370 17576376 aactaac MYB
RAV1-A binding site motif 17576446 17576450 caaca ABI3VP1
RAV1-A binding site motif 17578306 17578310 caaca ABI3VP1
RAV1-A binding site motif 17577537 17577541 caaca ABI3VP1
LFY consensus binding site motif 17577601 17577606 ccagtg LFY
LFY consensus binding site motif 17578019 17578024 ccactg LFY
ABRE-like binding site motif 17578396 17578403 gacgtgtc ...
ABRE-like binding site motif 17578482 17578489 cacgtgtc ...
ABRE-like binding site motif 17578102 17578109 gacgtgtc ...
GATA promoter motif [LRE] 17576227 17576232 tgatag ...
GATA promoter motif [LRE] 17578250 17578255 agatag ...
GATA promoter motif [LRE] 17577997 17578002 agatag ...
G-box promoter motif [LRE] 17578482 17578487 cacgtg ...
G-box promoter motif [LRE] 17578481 17578486 cacgtg ...
GCC-box promoter motif 17576423 17576428 gccgcc ...
Hexamer promoter motif 17578119 17578124 ccgtcg ...
SORLREP1 17577076 17577085 ttttactagt ...
SORLREP3 17577813 17577821 tgtatatat ...
SORLIP2 17576480 17576484 gggcc ...

Copyright © 2012. All rights reserved. Credits