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Summary of properties of promoter region AT3G48480


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G48480 protein Chr3:17970046 - 17971785 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G48480

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 17970264 17970269 cacatg BHLH
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 17970854 17970859 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 17971301 17971306 actcat bZIP
W-box promoter motif 17971062 17971067 ttgacc WRKY
W-box promoter motif 17971332 17971337 ttgact WRKY
W-box promoter motif 17971617 17971622 ttgacc WRKY
W-box promoter motif 17970907 17970912 ttgact WRKY
ARF1 binding site motif 17970234 17970239 tgtctc ARF
ARF1 binding site motif 17971600 17971605 tgtctc ARF
ARF1 binding site motif 17970667 17970672 tgtctc ARF
DPBF1&2 binding site motif 17970312 17970318 acacttg bZIP
DPBF1&2 binding site motif 17970264 17970270 acacatg bZIP
MYB binding site promoter 17971106 17971113 caccaaac MYB
MYB4 binding site motif 17971107 17971113 accaaac MYB
RAV1-A binding site motif 17970310 17970314 caaca ABI3VP1
RAV1-A binding site motif 17970411 17970415 caaca ABI3VP1
RAV1-A binding site motif 17970688 17970692 caaca ABI3VP1
RAV1-A binding site motif 17971232 17971236 caaca ABI3VP1
RAV1-A binding site motif 17971298 17971302 caaca ABI3VP1
RAV1-A binding site motif 17971243 17971247 caaca ABI3VP1
LFY consensus binding site motif 17971264 17971269 ccattg LFY
LFY consensus binding site motif 17971134 17971139 ccattg LFY
LFY consensus binding site motif 17970763 17970768 ccaatg LFY
LFY consensus binding site motif 17970187 17970192 ccactg LFY
ARF binding site motif 17970234 17970239 tgtctc ...
ARF binding site motif 17971600 17971605 tgtctc ...
ARF binding site motif 17970667 17970672 tgtctc ...
GATA promoter motif [LRE] 17970282 17970287 agatag ...
GATA promoter motif [LRE] 17970838 17970843 tgataa ...
GATA promoter motif [LRE] 17971346 17971351 tgataa ...
Ibox promoter motif 17970839 17970844 gataag ...
T-box promoter motif 17971112 17971117 actttg ...
T-box promoter motif 17970589 17970594 actttg ...
T-box promoter motif 17970395 17970400 actttg ...
SORLIP1 17970292 17970297 agccac ...

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