AGRIS logo
Home AtcisDB AtTFDB Regulatory
Network
People Downloads External Resources Publications

Summary of properties of promoter region AT3G56400


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G56400 WRKY family transcription factor Chr3:20921454 - 20924388 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G56400

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 20921508 20921513 cacatg BHLH
ARF1 binding site motif 20923716 20923721 tgtctc ARF
ARF1 binding site motif 20922468 20922473 tgtctc ARF
ARF1 binding site motif 20921518 20921523 tgtctc ARF
MYB binding site promoter 20922719 20922726 aaccaaac MYB
MYB4 binding site motif 20922719 20922725 accaaac MYB
RAV1-A binding site motif 20921686 20921690 caaca ABI3VP1
RAV1-A binding site motif 20924307 20924311 caaca ABI3VP1
RAV1-A binding site motif 20923417 20923421 caaca ABI3VP1
RAV1-A binding site motif 20921637 20921641 caaca ABI3VP1
RAV1-A binding site motif 20921593 20921597 caaca ABI3VP1
RAV1-A binding site motif 20921540 20921544 caaca ABI3VP1
LFY consensus binding site motif 20922146 20922151 ccattg LFY
LFY consensus binding site motif 20923098 20923103 ccaatg LFY
LFY consensus binding site motif 20923271 20923276 ccattg LFY
LFY consensus binding site motif 20922277 20922282 ccattg LFY
ARF binding site motif 20923716 20923721 tgtctc ...
ARF binding site motif 20922468 20922473 tgtctc ...
ARF binding site motif 20921518 20921523 tgtctc ...
BoxII promoter motif 20922857 20922862 ggttaa ...
DRE-like promoter motif 20922258 20922266 agccgacca ...
GATA promoter motif [LRE] 20921752 20921757 tgatag ...
GATA promoter motif [LRE] 20921765 20921770 tgatag ...
GATA promoter motif [LRE] 20921997 20922002 agatag ...
GATA promoter motif [LRE] 20922069 20922074 tgataa ...
GATA promoter motif [LRE] 20923022 20923027 agataa ...
GATA promoter motif [LRE] 20923053 20923058 tgataa ...
GATA promoter motif [LRE] 20923251 20923256 agatag ...
GATA promoter motif [LRE] 20923461 20923466 agatag ...
GATA promoter motif [LRE] 20923625 20923630 agataa ...
GATA promoter motif [LRE] 20923770 20923775 tgatag ...
GATA promoter motif [LRE] 20923777 20923782 tgataa ...
GATA promoter motif [LRE] 20923834 20923839 agataa ...
GATA promoter motif [LRE] 20923722 20923727 agataa ...
GATA promoter motif [LRE] 20922819 20922824 agataa ...
GATA promoter motif [LRE] 20922402 20922407 tgataa ...
GATA promoter motif [LRE] 20922229 20922234 tgataa ...
GATA promoter motif [LRE] 20921658 20921663 tgataa ...
GATA promoter motif [LRE] 20921504 20921509 tgataa ...
Ibox promoter motif 20923778 20923783 gataag ...
Ibox promoter motif 20924213 20924218 gataag ...
Ibox promoter motif 20922575 20922580 gataag ...
L1-box promoter motif 20923122 20923129 taaatgta ...
SBP-box promoter motif 20922522 20922530 tgcgtacaa ...
T-box promoter motif 20922845 20922850 actttg ...
Z-box promoter motif 20922757 20922764 atacgtgt ...
SORLIP1 20923146 20923151 agccac ...
SORLIP2 20923260 20923264 gggcc ...
SORLIP2 20923268 20923272 gggcc ...
SORLIP5 20923169 20923175 gagtgag ...

Copyright © 2012. All rights reserved. Credits