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Summary of properties of promoter region AT3G57990


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G57990 protein Chr3:21482461 - 21485324 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G57990

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AG BS in AP3 21484813 21484822 ccatttttag MADS
AP1 BS in AP3 21484813 21484822 ccatttttag MADS
AtMYC2 BS in RD22 21482775 21482780 cacatg BHLH
AtMYC2 BS in RD22 21483775 21483780 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 21484218 21484225 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 21484140 21484147 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 21482737 21482742 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 21483710 21483715 actcat bZIP
W-box promoter motif 21482653 21482658 ttgacc WRKY
ABFs binding site motif 21483808 21483815 cacgtggc bZIP
ARF1 binding site motif 21483629 21483634 tgtctc ARF
ATHB2 binding site motif 21483087 21483095 taataatta HB
ATHB2 binding site motif 21483145 21483153 taataatta HB
CCA1 binding site motif 21484583 21484590 aaaaatct MYB-related
DPBF1&2 binding site motif 21482774 21482780 acacatg bZIP
DPBF1&2 binding site motif 21483740 21483746 acacacg bZIP
DPBF1&2 binding site motif 21483807 21483813 acacgtg bZIP
DPBF1&2 binding site motif 21485254 21485260 acacgag bZIP
DPBF1&2 binding site motif 21483385 21483391 acacacg bZIP
DPBF1&2 binding site motif 21482501 21482507 acacaag bZIP
MYB binding site promoter 21484535 21484542 aaccaacc MYB
MYB binding site promoter 21482704 21482711 caccaaac MYB
MYB4 binding site motif 21482575 21482581 aacaaac MYB
MYB4 binding site motif 21483355 21483361 aacaaac MYB
MYB4 binding site motif 21484532 21484538 aacaacc MYB
MYB4 binding site motif 21485132 21485138 aacaaac MYB
MYB4 binding site motif 21482704 21482710 accaaac MYB
RAV1-A binding site motif 21482574 21482578 caaca ABI3VP1
RAV1-A binding site motif 21482607 21482611 caaca ABI3VP1
RAV1-A binding site motif 21483070 21483074 caaca ABI3VP1
RAV1-A binding site motif 21483118 21483122 caaca ABI3VP1
RAV1-A binding site motif 21483949 21483953 caaca ABI3VP1
RAV1-A binding site motif 21484313 21484317 caaca ABI3VP1
RAV1-A binding site motif 21484804 21484808 caaca ABI3VP1
RAV1-A binding site motif 21483491 21483495 caaca ABI3VP1
RAV1-A binding site motif 21483444 21483448 caaca ABI3VP1
TGA1 binding site motif 21483862 21483869 tgacgtgg bZIP
LFY consensus binding site motif 21483520 21483525 ccattg LFY
ABRE binding site motif 21483808 21483815 cacgtggc ...
ABRE-like binding site motif 21483808 21483815 cacgtggc ...
ARF binding site motif 21483629 21483634 tgtctc ...
BoxII promoter motif 21484181 21484186 ggttaa ...
BoxII promoter motif 21484673 21484678 ggttaa ...
BoxII promoter motif 21485171 21485176 ggttaa ...
BoxII promoter motif 21484901 21484906 ggttaa ...
BoxII promoter motif 21484303 21484308 ggttaa ...
GATA promoter motif [LRE] 21482511 21482516 agataa ...
GATA promoter motif [LRE] 21482530 21482535 agataa ...
GATA promoter motif [LRE] 21482644 21482649 tgataa ...
GATA promoter motif [LRE] 21482888 21482893 agataa ...
GATA promoter motif [LRE] 21483566 21483571 agataa ...
GATA promoter motif [LRE] 21484116 21484121 agataa ...
GATA promoter motif [LRE] 21484951 21484956 agataa ...
GATA promoter motif [LRE] 21485180 21485185 agataa ...
GATA promoter motif [LRE] 21483132 21483137 agataa ...
GATA promoter motif [LRE] 21483057 21483062 tgataa ...
GATA promoter motif [LRE] 21482989 21482994 agatag ...
G-box promoter motif [LRE] 21483808 21483813 cacgtg ...
G-box promoter motif [LRE] 21483807 21483812 cacgtg ...
Hexamer promoter motif 21483575 21483580 ccgtcg ...
Ibox promoter motif 21482531 21482536 gataag ...
Ibox promoter motif 21485179 21485184 gataag ...
L1-box promoter motif 21482514 21482521 taaatgca ...
T-box promoter motif 21483276 21483281 actttg ...
T-box promoter motif 21483459 21483464 actttg ...
T-box promoter motif 21484289 21484294 actttg ...
T-box promoter motif 21484010 21484015 actttg ...
TELO-box promoter motif 21484992 21485000 aaaccctaa ...
Z-box promoter motif 21483383 21483390 atacgtgt ...
SORLREP3 21483123 21483131 tgtatatat ...
SORLIP1 21484852 21484857 agccac ...
SORLIP2 21483770 21483774 gggcc ...
SORLIP5 21483650 21483656 gagtgag ...
SORLIP5 21484882 21484888 gagtgag ...

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