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Summary of properties of promoter region AT3G60960


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G60960 protein Chr3:22543747 - 22546679 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G60960

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 22545521 22545526 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 22545662 22545667 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 22545686 22545691 actcat bZIP
W-box promoter motif 22544142 22544147 ttgact WRKY
W-box promoter motif 22546158 22546163 ttgacc WRKY
W-box promoter motif 22546473 22546478 ttgact WRKY
W-box promoter motif 22545742 22545747 ttgact WRKY
W-box promoter motif 22544041 22544046 ttgact WRKY
ARF1 binding site motif 22546448 22546453 tgtctc ARF
ARF1 binding site motif 22544326 22544331 tgtctc ARF
DPBF1&2 binding site motif 22546522 22546528 acacgtg bZIP
DPBF1&2 binding site motif 22546514 22546520 acaccgg bZIP
DPBF1&2 binding site motif 22545351 22545357 acactag bZIP
E2F binding site motif 22544057 22544064 tttcccgc E2F-DP
MYB4 binding site motif 22545309 22545315 aactacc MYB
MYB4 binding site motif 22545158 22545164 acctaac MYB
MYB4 binding site motif 22544207 22544213 aacaaac MYB
RAV1-A binding site motif 22543801 22543805 caaca ABI3VP1
RAV1-A binding site motif 22543882 22543886 caaca ABI3VP1
RAV1-A binding site motif 22544714 22544718 caaca ABI3VP1
RAV1-A binding site motif 22545539 22545543 caaca ABI3VP1
RAV1-A binding site motif 22545721 22545725 caaca ABI3VP1
RAV1-A binding site motif 22546092 22546096 caaca ABI3VP1
RAV1-A binding site motif 22545226 22545230 caaca ABI3VP1
RAV1-A binding site motif 22545181 22545185 caaca ABI3VP1
RAV1-A binding site motif 22544210 22544214 caaca ABI3VP1
RAV1-B binding site motif 22546672 22546677 cacctg ABI3VP1
LFY consensus binding site motif 22546155 22546160 ccattg LFY
LFY consensus binding site motif 22544103 22544108 ccattg LFY
ABRE-like binding site motif 22543907 22543914 gacgtggc ...
ABRE-like binding site motif 22546523 22546530 cacgtgta ...
ARF binding site motif 22546448 22546453 tgtctc ...
ARF binding site motif 22544326 22544331 tgtctc ...
BoxII promoter motif 22544434 22544439 ggttaa ...
BoxII promoter motif 22545607 22545612 ggttaa ...
DRE-like promoter motif 22544579 22544587 tgccgactt ...
DRE-like promoter motif 22544546 22544554 agccgactt ...
GATA promoter motif [LRE] 22544871 22544876 agataa ...
GATA promoter motif [LRE] 22546105 22546110 tgatag ...
GATA promoter motif [LRE] 22545779 22545784 tgatag ...
GATA promoter motif [LRE] 22544489 22544494 agataa ...
G-box promoter motif [LRE] 22546523 22546528 cacgtg ...
G-box promoter motif [LRE] 22546522 22546527 cacgtg ...
GCC-box promoter motif 22546289 22546294 gccgcc ...
GCC-box promoter motif 22546511 22546516 gccgcc ...
T-box promoter motif 22545796 22545801 actttg ...
T-box promoter motif 22546284 22546289 actttg ...
T-box promoter motif 22544330 22544335 actttg ...
TELO-box promoter motif 22544335 22544343 aaaccctaa ...
SORLIP2 22546606 22546610 gggcc ...
SORLIP2 22544605 22544609 gggcc ...
SORLIP5 22545682 22545688 gagtgag ...

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