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Summary of properties of promoter region AT3G62550


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT3G62550 protein Chr3:23146287 - 23146959 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT3G62550

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
W-box promoter motif 23146406 23146411 ttgacc WRKY
W-box promoter motif 23146675 23146680 ttgact WRKY
CArG promoter motif 23146411 23146420 ccattaaagg MADS
CArG promoter motif 23146410 23146419 cctttaatgg MADS
LFY consensus binding site motif 23146332 23146337 ccactg LFY
LFY consensus binding site motif 23146422 23146427 ccattg LFY
LFY consensus binding site motif 23146444 23146449 ccattg LFY
LFY consensus binding site motif 23146444 23146449 ccaatg LFY
LFY consensus binding site motif 23146309 23146314 ccattg LFY
GATA promoter motif [LRE] 23146395 23146400 tgataa ...
GATA promoter motif [LRE] 23146874 23146879 agataa ...
GATA promoter motif [LRE] 23146950 23146955 agataa ...
GATA promoter motif [LRE] 23146920 23146925 tgataa ...
GATA promoter motif [LRE] 23146845 23146850 agataa ...
GATA promoter motif [LRE] 23146599 23146604 agatag ...
GATA promoter motif [LRE] 23146523 23146528 agataa ...
Hexamer promoter motif 23146296 23146301 ccgtcg ...
Ibox promoter motif 23146875 23146880 gataag ...
Ibox promoter motif 23146949 23146954 gataag ...
Ibox promoter motif 23146522 23146527 gataag ...
Z-box promoter motif 23146636 23146643 atacgtgt ...
SORLIP1 23146330 23146335 agccac ...
SORLIP2 23146367 23146371 gggcc ...
SORLIP2 23146418 23146422 gggcc ...

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