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Summary of properties of promoter region AT4G01970


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT4G01970 glycosyl hydrolase family 36 Chr4:857007 - 860008 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT4G01970

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 858905 858911 ctaacca MYB
Bellringer/replumless/pennywise BS1 IN AG 859172 859179 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 859457 859464 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 859055 859062 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 858602 858607 actcat bZIP
W-box promoter motif 858510 858515 ttgact WRKY
W-box promoter motif 859159 859164 ttgacc WRKY
W-box promoter motif 857873 857878 ttgact WRKY
W-box promoter motif 857386 857391 ttgact WRKY
W-box promoter motif 857084 857089 ttgact WRKY
ARF1 binding site motif 859480 859485 tgtctc ARF
CCA1 binding site motif 859851 859858 aaaaatct MYB-related
CCA1 binding site motif 859047 859054 aaaaatct MYB-related
DPBF1&2 binding site motif 857396 857402 acacaag bZIP
DPBF1&2 binding site motif 857977 857983 acacacg bZIP
DPBF1&2 binding site motif 858364 858370 acacaag bZIP
DPBF1&2 binding site motif 858663 858669 acacggg bZIP
MYB3 binding site motif 859195 859202 taactaac MYB
MYB3 binding site motif 858998 859005 taactaac MYB
MYB4 binding site motif 859196 859202 aactaac MYB
MYB4 binding site motif 858998 859004 aactaac MYB
RAV1-A binding site motif 857053 857057 caaca ABI3VP1
RAV1-A binding site motif 857394 857398 caaca ABI3VP1
RAV1-A binding site motif 857694 857698 caaca ABI3VP1
RAV1-A binding site motif 857829 857833 caaca ABI3VP1
RAV1-A binding site motif 858954 858958 caaca ABI3VP1
RAV1-A binding site motif 858692 858696 caaca ABI3VP1
RAV1-A binding site motif 858533 858537 caaca ABI3VP1
RAV1-A binding site motif 857725 857729 caaca ABI3VP1
RAV1-A binding site motif 857479 857483 caaca ABI3VP1
LFY consensus binding site motif 857989 857994 ccattg LFY
LFY consensus binding site motif 858100 858105 ccattg LFY
LFY consensus binding site motif 857359 857364 ccattg LFY
LFY consensus binding site motif 857087 857092 ccattg LFY
ARF binding site motif 859480 859485 tgtctc ...
BoxII promoter motif 859015 859020 ggttaa ...
BoxII promoter motif 858915 858920 ggttaa ...
GATA promoter motif [LRE] 857888 857893 tgataa ...
GATA promoter motif [LRE] 858759 858764 agataa ...
GATA promoter motif [LRE] 859901 859906 agataa ...
GATA promoter motif [LRE] 858203 858208 agatag ...
GATA promoter motif [LRE] 857906 857911 tgataa ...
Ibox promoter motif 859246 859251 gataag ...
L1-box promoter motif 858121 858128 taaatgta ...
L1-box promoter motif 859890 859897 taaatgta ...
SBP-box promoter motif 859760 859768 ttcgtacaa ...
T-box promoter motif 858727 858732 actttg ...
SORLREP3 859971 859979 tgtatatat ...
SORLIP2 858804 858808 gggcc ...
SORLIP2 858711 858715 gggcc ...
SORLIP2 858653 858657 gggcc ...

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