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Summary of properties of promoter region AT4G14560


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT4G14560 auxin-responsive protein IAA1 Chr4:8358058 - 8361060 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT4G14560

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 8358586 8358592 ctaacca MYB
AtMYC2 BS in RD22 8358275 8358280 cacatg BHLH
AtMYC2 BS in RD22 8359230 8359235 cacatg BHLH
AtMYC2 BS in RD22 8359999 8360004 cacatg BHLH
AtMYC2 BS in RD22 8360202 8360207 cacatg BHLH
AtMYC2 BS in RD22 8360264 8360269 cacatg BHLH
AtMYC2 BS in RD22 8358967 8358972 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 8358662 8358669 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 8360802 8360807 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 8359606 8359611 actcat bZIP
W-box promoter motif 8360478 8360483 ttgacc WRKY
W-box promoter motif 8360808 8360813 ttgacc WRKY
W-box promoter motif 8358750 8358755 ttgact WRKY
CArG promoter motif 8358716 8358725 ccaaaaaagg MADS
CArG promoter motif 8358715 8358724 ccttttttgg MADS
ARF1 binding site motif 8360856 8360861 tgtctc ARF
ARF1 binding site motif 8360189 8360194 tgtctc ARF
ATHB2 binding site motif 8359614 8359622 taataatta HB
DPBF1&2 binding site motif 8358093 8358099 acacgtg bZIP
DPBF1&2 binding site motif 8358240 8358246 acacgag bZIP
DPBF1&2 binding site motif 8359229 8359235 acacatg bZIP
DPBF1&2 binding site motif 8360621 8360627 acactag bZIP
DPBF1&2 binding site motif 8358242 8358248 acactcg bZIP
MYB binding site promoter 8359268 8359275 cacctacc MYB
MYB4 binding site motif 8359132 8359138 aacaaac MYB
MYB4 binding site motif 8359269 8359275 acctacc MYB
MYB4 binding site motif 8360527 8360533 accaaac MYB
MYB4 binding site motif 8360564 8360570 aactacc MYB
RAV1-A binding site motif 8359182 8359186 caaca ABI3VP1
RAV1-A binding site motif 8359659 8359663 caaca ABI3VP1
RAV1-A binding site motif 8359883 8359887 caaca ABI3VP1
RAV1-A binding site motif 8360087 8360091 caaca ABI3VP1
RAV1-A binding site motif 8360610 8360614 caaca ABI3VP1
RAV1-A binding site motif 8360619 8360623 caaca ABI3VP1
RAV1-A binding site motif 8361055 8361059 caaca ABI3VP1
RAV1-A binding site motif 8359730 8359734 caaca ABI3VP1
RAV1-A binding site motif 8359637 8359641 caaca ABI3VP1
LFY consensus binding site motif 8358866 8358871 ccaatg LFY
ARF binding site motif 8360856 8360861 tgtctc ...
ARF binding site motif 8360189 8360194 tgtctc ...
BoxII promoter motif 8360993 8360998 ggttaa ...
EveningElement promoter motif 8360685 8360693 aaaatatct ...
EveningElement promoter motif 8360063 8360071 aaaatatct ...
GATA promoter motif [LRE] 8358124 8358129 agataa ...
GATA promoter motif [LRE] 8358798 8358803 agataa ...
GATA promoter motif [LRE] 8359043 8359048 tgatag ...
GATA promoter motif [LRE] 8359152 8359157 tgataa ...
GATA promoter motif [LRE] 8359830 8359835 agatag ...
GATA promoter motif [LRE] 8359347 8359352 tgataa ...
GATA promoter motif [LRE] 8359256 8359261 tgataa ...
GATA promoter motif [LRE] 8358759 8358764 agataa ...
G-box promoter motif [LRE] 8358094 8358099 cacgtg ...
G-box promoter motif [LRE] 8358093 8358098 cacgtg ...
Ibox promoter motif 8358799 8358804 gataag ...
Ibox promoter motif 8358758 8358763 gataag ...
L1-box promoter motif 8358303 8358310 taaatgca ...
T-box promoter motif 8358450 8358455 actttg ...
T-box promoter motif 8358850 8358855 actttg ...
T-box promoter motif 8358280 8358285 actttg ...
SORLIP1 8358156 8358161 agccac ...
SORLIP2 8360004 8360008 gggcc ...
SORLIP5 8358860 8358866 gagtgag ...

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