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Summary of properties of promoter region AT4G25530


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT4G25530 homeodomain protein FWA Chr4:13035810 - 13038368 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT4G25530

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 13037090 13037095 cacatg BHLH
AtMYC2 BS in RD22 13037858 13037863 cacatg BHLH
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 13037369 13037374 actcat bZIP
W-box promoter motif 13036543 13036548 ttgacc WRKY
W-box promoter motif 13037414 13037419 ttgacc WRKY
W-box promoter motif 13036591 13036596 ttgacc WRKY
W-box promoter motif 13036392 13036397 ttgact WRKY
AGL3 binding site motif 13038154 13038169 ttactaaatttagtaa MADS
AGL3 binding site motif 13038153 13038168 ttactaaatttagtaa MADS
CCA1 binding site motif 13037508 13037515 aaaaatct MYB-related
DPBF1&2 binding site motif 13036640 13036646 acacgtg bZIP
DPBF1&2 binding site motif 13038016 13038022 acacaag bZIP
MYB1 binding site motif 13036727 13036734 ctcctacc MYB
MYB4 binding site motif 13036753 13036759 aactaac MYB
RAV1-A binding site motif 13036093 13036097 caaca ABI3VP1
RAV1-A binding site motif 13036120 13036124 caaca ABI3VP1
RAV1-A binding site motif 13036981 13036985 caaca ABI3VP1
RAV1-A binding site motif 13036988 13036992 caaca ABI3VP1
RAV1-A binding site motif 13037153 13037157 caaca ABI3VP1
RAV1-A binding site motif 13037827 13037831 caaca ABI3VP1
RAV1-A binding site motif 13038354 13038358 caaca ABI3VP1
RAV1-A binding site motif 13037839 13037843 caaca ABI3VP1
RAV1-A binding site motif 13037281 13037285 caaca ABI3VP1
LFY consensus binding site motif 13036859 13036864 ccaatg LFY
LFY consensus binding site motif 13037008 13037013 ccaatg LFY
LFY consensus binding site motif 13038147 13038152 ccattg LFY
ABRE binding site motif 13036689 13036696 tacgtggc ...
ABRE-like binding site motif 13036689 13036696 tacgtggc ...
ABRE-like binding site motif 13036638 13036645 cacgtgtc ...
BoxII promoter motif 13035981 13035986 ggttaa ...
GATA promoter motif [LRE] 13035830 13035835 agataa ...
GATA promoter motif [LRE] 13036435 13036440 tgataa ...
GATA promoter motif [LRE] 13036741 13036746 agatag ...
GATA promoter motif [LRE] 13036749 13036754 agatag ...
GATA promoter motif [LRE] 13036773 13036778 agataa ...
GATA promoter motif [LRE] 13036908 13036913 agataa ...
GATA promoter motif [LRE] 13038061 13038066 agataa ...
GATA promoter motif [LRE] 13037935 13037940 tgataa ...
GATA promoter motif [LRE] 13037446 13037451 tgatag ...
GATA promoter motif [LRE] 13037310 13037315 agataa ...
GATA promoter motif [LRE] 13037225 13037230 tgatag ...
GATA promoter motif [LRE] 13036074 13036079 tgataa ...
G-box promoter motif [LRE] 13036641 13036646 cacgtg ...
G-box promoter motif [LRE] 13036640 13036645 cacgtg ...
Hexamer promoter motif 13038276 13038281 ccgtcg ...
Hexamer promoter motif 13038321 13038326 ccgtcg ...
Ibox promoter motif 13036436 13036441 gataag ...
Ibox promoter motif 13036769 13036774 gataag ...
Ibox promoter motif 13038342 13038347 gataag ...
LTRE promoter motif 13036636 13036642 accgaca ...
SORLIP2 13038254 13038258 gggcc ...

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