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Summary of properties of promoter region AT4G37640


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT4G37640 calcium-transporting ATPase 2 plasma membrane-type (Ca2+-ATPase isoform 2) Chr4:17686933 - 17689802 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT4G37640

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 17687729 17687735 ctaacca MYB
Bellringer/replumless/pennywise BS1 IN AG 17686986 17686993 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 17689346 17689351 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 17687283 17687288 actcat bZIP
W-box promoter motif 17689698 17689703 ttgacc WRKY
W-box promoter motif 17689651 17689656 ttgact WRKY
W-box promoter motif 17689170 17689175 ttgacc WRKY
W-box promoter motif 17689069 17689074 ttgacc WRKY
W-box promoter motif 17688864 17688869 ttgact WRKY
CArG promoter motif 17688798 17688807 cctataaagg MADS
CArG promoter motif 17688797 17688806 cctttatagg MADS
ARF1 binding site motif 17686934 17686939 tgtctc ARF
ARF1 binding site motif 17688935 17688940 tgtctc ARF
ATHB6 binding site motif 17687338 17687346 caattatta HB
CCA1 binding site motif 17687071 17687078 aaaaatct MYB-related
CCA1 binding site motif 17689240 17689247 aaaaatct MYB-related
DPBF1&2 binding site motif 17688058 17688064 acaccgg bZIP
DPBF1&2 binding site motif 17688561 17688567 acacgag bZIP
DPBF1&2 binding site motif 17688906 17688912 acactag bZIP
DPBF1&2 binding site motif 17689634 17689640 acacacg bZIP
DPBF1&2 binding site motif 17687393 17687399 acactcg bZIP
MYB binding site promoter 17687568 17687575 caccaaac MYB
MYB binding site promoter 17687999 17688006 aacctaac MYB
MYB4 binding site motif 17687569 17687575 accaaac MYB
MYB4 binding site motif 17688000 17688006 acctaac MYB
MYB4 binding site motif 17688954 17688960 accaaac MYB
MYB4 binding site motif 17687667 17687673 aacaacc MYB
RAV1-A binding site motif 17687565 17687569 caaca ABI3VP1
RAV1-A binding site motif 17688252 17688256 caaca ABI3VP1
RAV1-A binding site motif 17688607 17688611 caaca ABI3VP1
RAV1-A binding site motif 17689202 17689206 caaca ABI3VP1
RAV1-A binding site motif 17689466 17689470 caaca ABI3VP1
RAV1-A binding site motif 17689627 17689631 caaca ABI3VP1
RAV1-A binding site motif 17687397 17687401 caaca ABI3VP1
LFY consensus binding site motif 17686981 17686986 ccattg LFY
LFY consensus binding site motif 17688595 17688600 ccaatg LFY
LFY consensus binding site motif 17689010 17689015 ccaatg LFY
LFY consensus binding site motif 17689010 17689015 ccattg LFY
ABRE binding site motif 17687035 17687042 tacgtggc ...
ABRE-like binding site motif 17687035 17687042 tacgtggc ...
ARF binding site motif 17686934 17686939 tgtctc ...
ARF binding site motif 17688935 17688940 tgtctc ...
BoxII promoter motif 17688232 17688237 ggttaa ...
GATA promoter motif [LRE] 17687767 17687772 agataa ...
Ibox promoter motif 17687766 17687771 gataag ...
L1-box promoter motif 17687586 17687593 taaatgca ...
T-box promoter motif 17689624 17689629 actttg ...
T-box promoter motif 17689173 17689178 actttg ...
SORLREP1 17689360 17689369 ttttactagt ...
SORLIP2 17688805 17688809 gggcc ...
SORLIP2 17688735 17688739 gggcc ...

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