AGRIS logo
Home AtcisDB AtTFDB Regulatory
Network
People Downloads External Resources Publications

Summary of properties of promoter region AT4G38660


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT4G38660 thaumatin-like protein Chr4:18068093 - 18070364 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT4G38660

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 18069961 18069966 cacatg BHLH
AtMYC2 BS in RD22 18069478 18069483 cacatg BHLH
AtMYC2 BS in RD22 18068805 18068810 cacatg BHLH
AtMYC2 BS in RD22 18068737 18068742 cacatg BHLH
Bellringer/replumless/pennywise BS2 IN AG 18068978 18068985 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 18068977 18068984 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 18068499 18068504 actcat bZIP
W-box promoter motif 18068097 18068102 ttgacc WRKY
W-box promoter motif 18068494 18068499 ttgact WRKY
W-box promoter motif 18069321 18069326 ttgact WRKY
ATHB1 binding site motif 18068943 18068951 caataattg HB
ATHB1 binding site motif 18068942 18068950 caattattg HB
ATHB5 binding site motif 18068943 18068951 caataattg HB
ATHB5 binding site motif 18068942 18068950 caattattg HB
DPBF1&2 binding site motif 18068830 18068836 acacttg bZIP
DPBF1&2 binding site motif 18069478 18069484 acacatg bZIP
DPBF1&2 binding site motif 18068805 18068811 acacatg bZIP
DPBF1&2 binding site motif 18068737 18068743 acacatg bZIP
MYB4 binding site motif 18069873 18069879 acctacc MYB
MYB4 binding site motif 18069744 18069750 aactaac MYB
MYB4 binding site motif 18069690 18069696 aacaaac MYB
MYB4 binding site motif 18069670 18069676 aactacc MYB
RAV1-A binding site motif 18068409 18068413 caaca ABI3VP1
RAV1-A binding site motif 18068550 18068554 caaca ABI3VP1
RAV1-A binding site motif 18069925 18069929 caaca ABI3VP1
RAV1-A binding site motif 18068864 18068868 caaca ABI3VP1
RAV1-A binding site motif 18068715 18068719 caaca ABI3VP1
RAV1-A binding site motif 18068678 18068682 caaca ABI3VP1
RAV1-A binding site motif 18068491 18068495 caaca ABI3VP1
RAV1-A binding site motif 18068363 18068367 caaca ABI3VP1
RAV1-A binding site motif 18068187 18068191 caaca ABI3VP1
LFY consensus binding site motif 18068450 18068455 ccattg LFY
LFY consensus binding site motif 18069120 18069125 ccaatg LFY
LFY consensus binding site motif 18069350 18069355 ccattg LFY
BoxII promoter motif 18068761 18068766 ggttaa ...
BoxII promoter motif 18070247 18070252 ggttaa ...
DRE-like promoter motif 18069967 18069975 ggccgactt ...
GATA promoter motif [LRE] 18068726 18068731 agatag ...
GATA promoter motif [LRE] 18068793 18068798 tgatag ...
GATA promoter motif [LRE] 18069374 18069379 agataa ...
GATA promoter motif [LRE] 18070209 18070214 agatag ...
GATA promoter motif [LRE] 18069776 18069781 tgataa ...
Ibox promoter motif 18069375 18069380 gataag ...
L1-box promoter motif 18068459 18068466 taaatgta ...
T-box promoter motif 18069156 18069161 actttg ...
SORLREP3 18069204 18069212 tgtatatat ...
SORLIP1 18068180 18068185 agccac ...
SORLIP1 18069532 18069537 agccac ...
SORLIP2 18069339 18069343 gggcc ...
SORLIP2 18069966 18069970 gggcc ...
SORLIP2 18069339 18069343 gggcc ...

Copyright © 2012. All rights reserved. Credits