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Summary of properties of promoter region AT5G02490


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G02490 dnaK-type molecular chaperone hsc70.1 - like Chr5:552641 - 554051 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G02490

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 552759 552765 ctaacca MYB
Bellringer/replumless/pennywise BS1 IN AG 552820 552827 aaattaaa Homeobox
W-box promoter motif 552652 552657 ttgacc WRKY
W-box promoter motif 553435 553440 ttgacc WRKY
W-box promoter motif 553047 553052 ttgact WRKY
ATHB2 binding site motif 552968 552976 taataatta HB
CCA1 binding site motif 553080 553087 aaaaatct MYB-related
CCA1 binding site motif 553264 553271 aaaaatct MYB-related
DPBF1&2 binding site motif 553811 553817 acacgcg bZIP
HSEs binding site motif 553988 553997 agaacattct HSF
HSEs binding site motif 553987 553996 agaatgttct HSF
MYB binding site promoter 552782 552789 aaccaacc MYB
MYB4 binding site motif 552861 552867 aacaaac MYB
MYB4 binding site motif 552782 552788 accaacc MYB
RAV1-A binding site motif 553809 553813 caaca ABI3VP1
RAV1-A binding site motif 553407 553411 caaca ABI3VP1
RAV1-A binding site motif 553347 553351 caaca ABI3VP1
RAV1-A binding site motif 553067 553071 caaca ABI3VP1
RAV1-A binding site motif 553016 553020 caaca ABI3VP1
RAV1-A binding site motif 552898 552902 caaca ABI3VP1
RAV1-A binding site motif 552719 552723 caaca ABI3VP1
RAV1-A binding site motif 552642 552646 caaca ABI3VP1
LFY consensus binding site motif 553692 553697 ccaatg LFY
LFY consensus binding site motif 552778 552783 ccattg LFY
ABRE-like binding site motif 553745 553752 tacgtgtc ...
GATA promoter motif [LRE] 553199 553204 agataa ...
GATA promoter motif [LRE] 553319 553324 agataa ...
GATA promoter motif [LRE] 553927 553932 tgatag ...
GATA promoter motif [LRE] 553477 553482 agataa ...
GATA promoter motif [LRE] 553024 553029 tgataa ...
GATA promoter motif [LRE] 552675 552680 agatag ...
GATA promoter motif [LRE] 552669 552674 agatag ...
Ibox promoter motif 553588 553593 gataag ...
T-box promoter motif 553493 553498 actttg ...
SORLIP2 553719 553723 gggcc ...
SORLIP2 553682 553686 gggcc ...

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