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Summary of properties of promoter region AT5G02530


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G02530 RNA and export factor binding protein Chr5:565854 - 568605 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G02530

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 566783 566788 cacatg BHLH
AtMYC2 BS in RD22 567831 567836 cacatg BHLH
AtMYC2 BS in RD22 568359 568364 cacatg BHLH
AtMYC2 BS in RD22 567879 567884 cacatg BHLH
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 568196 568201 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 568455 568460 actcat bZIP
W-box promoter motif 565864 565869 ttgacc WRKY
W-box promoter motif 566986 566991 ttgact WRKY
W-box promoter motif 567169 567174 ttgacc WRKY
W-box promoter motif 567907 567912 ttgact WRKY
W-box promoter motif 568274 568279 ttgact WRKY
CArG promoter motif 567939 567948 ccaaaaaagg MADS
CArG promoter motif 567938 567947 ccttttttgg MADS
ARF1 binding site motif 565901 565906 tgtctc ARF
DPBF1&2 binding site motif 566326 566332 acactcg bZIP
MYB binding site promoter 567047 567054 aacctaac MYB
MYB binding site promoter 567374 567381 cacctaac MYB
MYB binding site promoter 566720 566727 caccaacc MYB
MYB4 binding site motif 567048 567054 acctaac MYB
MYB4 binding site motif 567524 567530 aacaaac MYB
MYB4 binding site motif 567665 567671 accaacc MYB
MYB4 binding site motif 567591 567597 aacaaac MYB
MYB4 binding site motif 567374 567380 acctaac MYB
MYB4 binding site motif 566954 566960 aacaaac MYB
MYB4 binding site motif 566720 566726 accaacc MYB
RAV1-A binding site motif 566933 566937 caaca ABI3VP1
RAV1-A binding site motif 567457 567461 caaca ABI3VP1
RAV1-A binding site motif 568036 568040 caaca ABI3VP1
RAV1-A binding site motif 568519 568523 caaca ABI3VP1
RAV1-A binding site motif 566679 566683 caaca ABI3VP1
RAV1-A binding site motif 566245 566249 caaca ABI3VP1
RAV1-A binding site motif 566209 566213 caaca ABI3VP1
LFY consensus binding site motif 566792 566797 ccagtg LFY
LFY consensus binding site motif 568443 568448 ccactg LFY
LFY consensus binding site motif 568443 568448 ccagtg LFY
LFY consensus binding site motif 568389 568394 ccattg LFY
LFY consensus binding site motif 567846 567851 ccaatg LFY
LFY consensus binding site motif 567013 567018 ccaatg LFY
LFY consensus binding site motif 566320 566325 ccattg LFY
ARF binding site motif 565901 565906 tgtctc ...
BoxII promoter motif 567614 567619 ggttaa ...
BoxII promoter motif 568118 568123 ggttaa ...
BoxII promoter motif 568014 568019 ggttaa ...
BoxII promoter motif 566851 566856 ggttaa ...
DRE-like promoter motif 566315 566323 tgccgacaa ...
GATA promoter motif [LRE] 565922 565927 agatag ...
GATA promoter motif [LRE] 567027 567032 tgatag ...
GATA promoter motif [LRE] 567178 567183 agataa ...
GATA promoter motif [LRE] 567515 567520 tgatag ...
GATA promoter motif [LRE] 568251 568256 agataa ...
GATA promoter motif [LRE] 568570 568575 agataa ...
GATA promoter motif [LRE] 568031 568036 tgataa ...
GATA promoter motif [LRE] 567805 567810 tgatag ...
GATA promoter motif [LRE] 566443 566448 tgatag ...
T-box promoter motif 566989 566994 actttg ...
T-box promoter motif 566941 566946 actttg ...
SORLREP4 566823 566831 ctcctaatt ...
SORLIP2 568440 568444 gggcc ...
SORLIP2 568467 568471 gggcc ...
SORLIP5 568592 568598 gagtgag ...

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