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Summary of properties of promoter region AT5G04310


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G04310 pectate lyase-like protein Chr5:1207352 - 1209135 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G04310

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 1207619 1207624 cacatg BHLH
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1207406 1207411 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1207739 1207744 actcat bZIP
W-box promoter motif 1208233 1208238 ttgacc WRKY
W-box promoter motif 1208214 1208219 ttgacc WRKY
ARF1 binding site motif 1208401 1208406 tgtctc ARF
CCA1 binding site motif 1207779 1207786 aaaaatct MYB-related
DPBF1&2 binding site motif 1208170 1208176 acactcg bZIP
MYB4 binding site motif 1207957 1207963 aacaaac MYB
MYB4 binding site motif 1208959 1208965 aacaaac MYB
MYB4 binding site motif 1208210 1208216 acctaac MYB
MYB4 binding site motif 1208014 1208020 aacaacc MYB
RAV1-A binding site motif 1207921 1207925 caaca ABI3VP1
RAV1-A binding site motif 1208479 1208483 caaca ABI3VP1
RAV1-A binding site motif 1208353 1208357 caaca ABI3VP1
RAV1-A binding site motif 1208017 1208021 caaca ABI3VP1
RAV1-A binding site motif 1207712 1207716 caaca ABI3VP1
LFY consensus binding site motif 1208325 1208330 ccattg LFY
ABRE-like binding site motif 1208795 1208802 tacgtgga ...
ARF binding site motif 1208401 1208406 tgtctc ...
DRE-like promoter motif 1208435 1208443 agccgactt ...
GATA promoter motif [LRE] 1207728 1207733 tgataa ...
GATA promoter motif [LRE] 1208189 1208194 agataa ...
GATA promoter motif [LRE] 1208565 1208570 tgataa ...
GATA promoter motif [LRE] 1208224 1208229 agataa ...
GATA promoter motif [LRE] 1207875 1207880 tgatag ...
Ibox promoter motif 1208190 1208195 gataag ...
T-box promoter motif 1208031 1208036 actttg ...
TELO-box promoter motif 1208455 1208463 aaaccctaa ...
SORLIP1 1207490 1207495 agccac ...
SORLIP2 1209023 1209027 gggcc ...

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