AGRIS logo
Home AtcisDB AtTFDB Regulatory
Network
People Downloads External Resources Publications

Summary of properties of promoter region AT5G06150


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G06150 Cyclin B12 Chr5:1861628 - 1864630 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G06150

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 1862795 1862800 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 1863995 1864002 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 1863953 1863960 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 1863954 1863961 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1863877 1863882 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1862797 1862802 actcat bZIP
W-box promoter motif 1861683 1861688 ttgacc WRKY
W-box promoter motif 1863783 1863788 ttgact WRKY
W-box promoter motif 1864063 1864068 ttgact WRKY
ARF1 binding site motif 1863307 1863312 tgtctc ARF
DPBF1&2 binding site motif 1862436 1862442 acacttg bZIP
DPBF1&2 binding site motif 1862794 1862800 acacatg bZIP
DPBF1&2 binding site motif 1864429 1864435 acactag bZIP
HSEs binding site motif 1861819 1861828 agaagtttct HSF
HSEs binding site motif 1861818 1861827 agaaacttct HSF
MYB binding site promoter 1863472 1863479 aaccaaac MYB
MYB binding site promoter 1862380 1862387 caccaacc MYB
MYB binding site promoter 1862111 1862118 aaccaaac MYB
MYB4 binding site motif 1863477 1863483 aacaaac MYB
MYB4 binding site motif 1863448 1863454 accaaac MYB
MYB4 binding site motif 1862871 1862877 aactaac MYB
MYB4 binding site motif 1862566 1862572 aactacc MYB
MYB4 binding site motif 1862380 1862386 accaacc MYB
MYB4 binding site motif 1862128 1862134 aacaaac MYB
MYB4 binding site motif 1862111 1862117 accaaac MYB
MYB4 binding site motif 1862055 1862061 aactacc MYB
RAV1-A binding site motif 1862792 1862796 caaca ABI3VP1
RAV1-A binding site motif 1863333 1863337 caaca ABI3VP1
RAV1-A binding site motif 1863590 1863594 caaca ABI3VP1
RAV1-A binding site motif 1864517 1864521 caaca ABI3VP1
RAV1-A binding site motif 1863468 1863472 caaca ABI3VP1
RAV1-A binding site motif 1863200 1863204 caaca ABI3VP1
RAV1-A binding site motif 1862950 1862954 caaca ABI3VP1
RAV1-A binding site motif 1862610 1862614 caaca ABI3VP1
RAV1-A binding site motif 1862513 1862517 caaca ABI3VP1
RAV1-A binding site motif 1862096 1862100 caaca ABI3VP1
RAV1-A binding site motif 1861745 1861749 caaca ABI3VP1
LFY consensus binding site motif 1862072 1862077 ccaatg LFY
LFY consensus binding site motif 1863197 1863202 ccattg LFY
LFY consensus binding site motif 1864445 1864450 ccagtg LFY
LFY consensus binding site motif 1864029 1864034 ccaatg LFY
LFY consensus binding site motif 1862358 1862363 ccaatg LFY
LFY consensus binding site motif 1861976 1861981 ccaatg LFY
ARF binding site motif 1863307 1863312 tgtctc ...
GATA promoter motif [LRE] 1861919 1861924 agataa ...
GATA promoter motif [LRE] 1863930 1863935 tgatag ...
GATA promoter motif [LRE] 1864045 1864050 tgataa ...
GATA promoter motif [LRE] 1864143 1864148 tgatag ...
GATA promoter motif [LRE] 1864081 1864086 tgataa ...
GATA promoter motif [LRE] 1863786 1863791 tgatag ...
GATA promoter motif [LRE] 1862675 1862680 agataa ...
GATA promoter motif [LRE] 1862490 1862495 tgataa ...
GATA promoter motif [LRE] 1861722 1861727 tgataa ...
Ibox promoter motif 1862734 1862739 gataag ...
T-box promoter motif 1861856 1861861 actttg ...
T-box promoter motif 1863422 1863427 actttg ...
T-box promoter motif 1862837 1862842 actttg ...

Copyright © 2012. All rights reserved. Credits