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Summary of properties of promoter region AT5G06240


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G06240 unknown protein Chr5:1887030 - 1888313 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G06240

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
Bellringer/replumless/pennywise BS1 IN AG 1887207 1887214 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 1887263 1887270 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1887214 1887219 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1887860 1887865 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 1887708 1887713 actcat bZIP
W-box promoter motif 1887478 1887483 ttgacc WRKY
ARF1 binding site motif 1887875 1887880 tgtctc ARF
CCA1 binding site motif 1888110 1888117 aacaatct MYB-related
DPBF1&2 binding site motif 1887126 1887132 acacgag bZIP
DPBF1&2 binding site motif 1888013 1888019 acactag bZIP
MYB binding site promoter 1887667 1887674 aaccaaac MYB
MYB4 binding site motif 1887852 1887858 aacaaac MYB
MYB4 binding site motif 1887667 1887673 accaaac MYB
MYB4 binding site motif 1887250 1887256 aacaaac MYB
RAV1-A binding site motif 1888063 1888067 caaca ABI3VP1
RAV1-A binding site motif 1887742 1887746 caaca ABI3VP1
RAV1-A binding site motif 1887647 1887651 caaca ABI3VP1
RAV1-A binding site motif 1887071 1887075 caaca ABI3VP1
LFY consensus binding site motif 1887428 1887433 ccaatg LFY
ARF binding site motif 1887875 1887880 tgtctc ...
BoxII promoter motif 1887559 1887564 ggttaa ...
DRE-like promoter motif 1888136 1888144 aaccgacaa ...
GATA promoter motif [LRE] 1888244 1888249 tgataa ...
GATA promoter motif [LRE] 1887543 1887548 agataa ...
GATA promoter motif [LRE] 1887286 1887291 tgataa ...
Hexamer promoter motif 1888306 1888311 ccgtcg ...
LTRE promoter motif 1888137 1888143 accgaca ...
T-box promoter motif 1888073 1888078 actttg ...
T-box promoter motif 1887592 1887597 actttg ...
T-box promoter motif 1887481 1887486 actttg ...

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