AGRIS logo
Home AtcisDB AtTFDB Regulatory
Network
People Downloads External Resources Publications

Summary of properties of promoter region AT5G16220


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G16220 protein Chr5:5300605 - 5303358 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G16220

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYB2 BS in RD22 5300764 5300770 ctaacca MYB
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 5301534 5301539 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 5302249 5302254 actcat bZIP
W-box promoter motif 5300691 5300696 ttgact WRKY
W-box promoter motif 5301598 5301603 ttgacc WRKY
W-box promoter motif 5301288 5301293 ttgact WRKY
ARF1 binding site motif 5300666 5300671 tgtctc ARF
ATHB5 binding site motif 5303060 5303068 caatgattg HB
ATHB5 binding site motif 5303059 5303067 caatcattg HB
DPBF1&2 binding site motif 5302601 5302607 acactcg bZIP
MYB binding site promoter 5302619 5302626 aaccaaac MYB
MYB binding site promoter 5302629 5302636 aaccaaac MYB
MYB4 binding site motif 5302620 5302626 accaaac MYB
MYB4 binding site motif 5302630 5302636 accaaac MYB
MYB4 binding site motif 5300985 5300991 aacaaac MYB
RAV1-A binding site motif 5300940 5300944 caaca ABI3VP1
RAV1-A binding site motif 5300975 5300979 caaca ABI3VP1
RAV1-A binding site motif 5301013 5301017 caaca ABI3VP1
RAV1-A binding site motif 5301442 5301446 caaca ABI3VP1
RAV1-A binding site motif 5302652 5302656 caaca ABI3VP1
RAV1-A binding site motif 5303057 5303061 caaca ABI3VP1
RAV1-A binding site motif 5302605 5302609 caaca ABI3VP1
RAV1-A binding site motif 5301165 5301169 caaca ABI3VP1
RAV1-A binding site motif 5300981 5300985 caaca ABI3VP1
RAV1-A binding site motif 5300946 5300950 caaca ABI3VP1
RAV1-A binding site motif 5300638 5300642 caaca ABI3VP1
LFY consensus binding site motif 5301276 5301281 ccaatg LFY
ABRE-like binding site motif 5300999 5301006 tacgtgta ...
ARF binding site motif 5300666 5300671 tgtctc ...
BoxII promoter motif 5303134 5303139 ggttaa ...
BoxII promoter motif 5302616 5302621 ggttaa ...
BoxII promoter motif 5302546 5302551 ggttaa ...
BoxII promoter motif 5301930 5301935 ggttaa ...
DRE-like promoter motif 5302418 5302426 aaccgacga ...
GATA promoter motif [LRE] 5300887 5300892 agataa ...
GATA promoter motif [LRE] 5302758 5302763 tgataa ...
GATA promoter motif [LRE] 5303252 5303257 tgataa ...
GATA promoter motif [LRE] 5303151 5303156 tgataa ...
GATA promoter motif [LRE] 5302918 5302923 tgataa ...
GATA promoter motif [LRE] 5302185 5302190 agataa ...
GATA promoter motif [LRE] 5301867 5301872 agataa ...
GATA promoter motif [LRE] 5301756 5301761 agataa ...
GATA promoter motif [LRE] 5301680 5301685 tgatag ...
GATA promoter motif [LRE] 5301064 5301069 tgataa ...
GATA promoter motif [LRE] 5300870 5300875 agataa ...
Ibox promoter motif 5302917 5302922 gataag ...
L1-box promoter motif 5302479 5302486 taaatgta ...
SORLREP3 5300674 5300682 tgtatatat ...
SORLIP2 5303218 5303222 gggcc ...
SORLIP2 5303218 5303222 gggcc ...

Copyright © 2012. All rights reserved. Credits