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Summary of properties of promoter region AT5G27840


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G27840 serine Chr5:9865035 - 9868035 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G27840

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 9866484 9866489 cacatg BHLH
AtMYC2 BS in RD22 9867183 9867188 cacatg BHLH
AtMYC2 BS in RD22 9866378 9866383 cacatg BHLH
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 9867427 9867432 actcat bZIP
W-box promoter motif 9866771 9866776 ttgacc WRKY
W-box promoter motif 9867357 9867362 ttgacc WRKY
W-box promoter motif 9867697 9867702 ttgacc WRKY
W-box promoter motif 9867717 9867722 ttgacc WRKY
ATHB2 binding site motif 9865784 9865792 taataatta HB
CCA1 binding site motif 9866764 9866771 aaaaatct MYB-related
CCA1 binding site motif 9866777 9866784 aaaaatct MYB-related
DPBF1&2 binding site motif 9867183 9867189 acacatg bZIP
HSEs binding site motif 9867348 9867357 agaatcttct HSF
HSEs binding site motif 9867347 9867356 agaagattct HSF
MYB binding site promoter 9865298 9865305 caccaaac MYB
MYB binding site promoter 9865108 9865115 aaccaaac MYB
MYB4 binding site motif 9867592 9867598 accaaac MYB
MYB4 binding site motif 9866056 9866062 aacaaac MYB
MYB4 binding site motif 9865298 9865304 accaaac MYB
MYB4 binding site motif 9865108 9865114 accaaac MYB
RAV1-A binding site motif 9867062 9867066 caaca ABI3VP1
RAV1-A binding site motif 9867714 9867718 caaca ABI3VP1
RAV1-A binding site motif 9866808 9866812 caaca ABI3VP1
RAV1-A binding site motif 9866492 9866496 caaca ABI3VP1
RAV1-A binding site motif 9866441 9866445 caaca ABI3VP1
RAV1-A binding site motif 9865523 9865527 caaca ABI3VP1
RAV1-A binding site motif 9865304 9865308 caaca ABI3VP1
RAV1-A binding site motif 9865093 9865097 caaca ABI3VP1
LFY consensus binding site motif 9867341 9867346 ccattg LFY
LFY consensus binding site motif 9866293 9866298 ccactg LFY
LFY consensus binding site motif 9865290 9865295 ccattg LFY
BoxII promoter motif 9866618 9866623 ggttaa ...
GATA promoter motif [LRE] 9866079 9866084 tgataa ...
GATA promoter motif [LRE] 9868012 9868017 tgataa ...
GATA promoter motif [LRE] 9867996 9868001 agataa ...
GATA promoter motif [LRE] 9867158 9867163 tgataa ...
GATA promoter motif [LRE] 9867057 9867062 tgataa ...
GATA promoter motif [LRE] 9866722 9866727 agataa ...
GATA promoter motif [LRE] 9866521 9866526 tgatag ...
Ibox promoter motif 9867995 9868000 gataag ...
L1-box promoter motif 9866613 9866620 taaatgta ...
T-box promoter motif 9865994 9865999 actttg ...
T-box promoter motif 9865334 9865339 actttg ...
SORLREP3 9866214 9866222 tgtatatat ...
SORLREP4 9867645 9867653 ctcctaatt ...
SORLIP2 9867670 9867674 gggcc ...
SORLIP5 9866654 9866660 gagtgag ...

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