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Summary of properties of promoter region AT5G41310


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G41310 kinesin-related protein Chr5:16539619 - 16542620 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G41310

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 16540490 16540495 cacatg BHLH
AtMYC2 BS in RD22 16540491 16540496 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 16540078 16540085 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 16540561 16540568 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 16542599 16542606 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 16540418 16540425 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 16540122 16540129 aaattaaa Homeobox
Bellringer/replumless/pennywise BS2 IN AG 16539808 16539815 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 16539809 16539816 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 16539654 16539659 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 16541649 16541654 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 16540511 16540516 actcat bZIP
W-box promoter motif 16541779 16541784 ttgact WRKY
ABFs binding site motif 16541056 16541063 cacgtggc bZIP
ARF1 binding site motif 16540295 16540300 tgtctc ARF
ARF1 binding site motif 16540412 16540417 tgtctc ARF
ATHB2 binding site motif 16540931 16540939 taataatta HB
DPBF1&2 binding site motif 16540489 16540495 acacatg bZIP
DPBF1&2 binding site motif 16540491 16540497 acacatg bZIP
DPBF1&2 binding site motif 16539673 16539679 acactag bZIP
MYB binding site promoter 16540500 16540507 caccaaac MYB
MYB binding site promoter 16540184 16540191 aaccaaac MYB
MYB4 binding site motif 16540741 16540747 accaaac MYB
MYB4 binding site motif 16541237 16541243 aacaaac MYB
MYB4 binding site motif 16541974 16541980 aacaaac MYB
MYB4 binding site motif 16542454 16542460 aacaaac MYB
MYB4 binding site motif 16542489 16542495 aactaac MYB
MYB4 binding site motif 16540500 16540506 accaaac MYB
MYB4 binding site motif 16540184 16540190 accaaac MYB
RAV1-A binding site motif 16541147 16541151 caaca ABI3VP1
RAV1-A binding site motif 16542166 16542170 caaca ABI3VP1
RAV1-A binding site motif 16541466 16541470 caaca ABI3VP1
LFY consensus binding site motif 16539791 16539796 ccactg LFY
LFY consensus binding site motif 16541782 16541787 ccattg LFY
ABRE binding site motif 16541056 16541063 cacgtggc ...
ABRE-like binding site motif 16541056 16541063 cacgtggc ...
ARF binding site motif 16540295 16540300 tgtctc ...
ARF binding site motif 16540412 16540417 tgtctc ...
GATA promoter motif [LRE] 16539667 16539672 tgatag ...
GATA promoter motif [LRE] 16539826 16539831 tgataa ...
GATA promoter motif [LRE] 16540007 16540012 tgataa ...
GATA promoter motif [LRE] 16540395 16540400 agataa ...
GATA promoter motif [LRE] 16540522 16540527 tgataa ...
GATA promoter motif [LRE] 16541407 16541412 tgataa ...
GATA promoter motif [LRE] 16541480 16541485 tgataa ...
GATA promoter motif [LRE] 16541588 16541593 tgatag ...
GATA promoter motif [LRE] 16541609 16541614 tgatag ...
GATA promoter motif [LRE] 16542567 16542572 tgataa ...
GATA promoter motif [LRE] 16542550 16542555 agataa ...
GATA promoter motif [LRE] 16541261 16541266 agataa ...
GATA promoter motif [LRE] 16540968 16540973 agataa ...
GATA promoter motif [LRE] 16540316 16540321 tgataa ...
GATA promoter motif [LRE] 16540049 16540054 tgataa ...
GATA promoter motif [LRE] 16539638 16539643 tgatag ...
G-box promoter motif [LRE] 16541059 16541064 cacgtg ...
G-box promoter motif [LRE] 16541058 16541063 cacgtg ...
Ibox promoter motif 16539827 16539832 gataag ...
T-box promoter motif 16540799 16540804 actttg ...
Z-box promoter motif 16540364 16540371 atacgtgt ...
SORLIP1 16541929 16541934 agccac ...
SORLIP2 16541794 16541798 gggcc ...
SORLIP2 16541846 16541850 gggcc ...
SORLIP2 16541794 16541798 gggcc ...

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