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Summary of properties of promoter region AT5G50000


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G50000 protein kinase Chr5:20362357 - 20365359 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G50000

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 20365290 20365295 cacatg BHLH
AtMYC2 BS in RD22 20365277 20365282 cacatg BHLH
Bellringer/replumless/pennywise BS1 IN AG 20364165 20364172 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 20364307 20364314 aaattaaa Homeobox
Bellringer/replumless/pennywise BS1 IN AG 20363995 20364002 aaattaaa Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 20364034 20364039 actcat bZIP
W-box promoter motif 20362541 20362546 ttgacc WRKY
W-box promoter motif 20364301 20364306 ttgacc WRKY
W-box promoter motif 20364676 20364681 ttgact WRKY
ARF1 binding site motif 20363620 20363625 tgtctc ARF
ARF1 binding site motif 20364682 20364687 tgtctc ARF
ATHB2 binding site motif 20363285 20363293 taataatta HB
MYB4 binding site motif 20363107 20363113 aacaacc MYB
MYB4 binding site motif 20363588 20363594 aacaaac MYB
MYB4 binding site motif 20365146 20365152 accaacc MYB
MYB4 binding site motif 20362645 20362651 accaacc MYB
RAV1-A binding site motif 20363786 20363790 caaca ABI3VP1
RAV1-A binding site motif 20364475 20364479 caaca ABI3VP1
RAV1-A binding site motif 20364515 20364519 caaca ABI3VP1
RAV1-A binding site motif 20365156 20365160 caaca ABI3VP1
RAV1-A binding site motif 20363859 20363863 caaca ABI3VP1
RAV1-A binding site motif 20363753 20363757 caaca ABI3VP1
RAV1-A binding site motif 20362432 20362436 caaca ABI3VP1
LFY consensus binding site motif 20362484 20362489 ccaatg LFY
LFY consensus binding site motif 20363167 20363172 ccaatg LFY
LFY consensus binding site motif 20364394 20364399 ccattg LFY
LFY consensus binding site motif 20362533 20362538 ccattg LFY
ABRE-like binding site motif 20364502 20364509 tacgtgga ...
ABRE-like binding site motif 20364624 20364631 tacgtgta ...
ARF binding site motif 20363620 20363625 tgtctc ...
ARF binding site motif 20364682 20364687 tgtctc ...
BoxII promoter motif 20363695 20363700 ggttaa ...
BoxII promoter motif 20364321 20364326 ggttaa ...
BoxII promoter motif 20364560 20364565 ggttaa ...
EveningElement promoter motif 20363299 20363307 aaaatatct ...
GATA promoter motif [LRE] 20362958 20362963 tgataa ...
GATA promoter motif [LRE] 20363053 20363058 agataa ...
GATA promoter motif [LRE] 20363079 20363084 agataa ...
GATA promoter motif [LRE] 20363348 20363353 tgatag ...
GATA promoter motif [LRE] 20363402 20363407 agataa ...
GATA promoter motif [LRE] 20363732 20363737 tgataa ...
GATA promoter motif [LRE] 20364059 20364064 agataa ...
GATA promoter motif [LRE] 20364991 20364996 tgataa ...
GATA promoter motif [LRE] 20365168 20365173 tgataa ...
GATA promoter motif [LRE] 20364701 20364706 tgataa ...
GATA promoter motif [LRE] 20364606 20364611 tgataa ...
GATA promoter motif [LRE] 20363763 20363768 agatag ...
GATA promoter motif [LRE] 20363213 20363218 agataa ...
GATA promoter motif [LRE] 20363185 20363190 tgataa ...
GATA promoter motif [LRE] 20362871 20362876 tgataa ...
Ibox promoter motif 20363054 20363059 gataag ...
Ibox promoter motif 20363403 20363408 gataag ...
Ibox promoter motif 20364700 20364705 gataag ...
L1-box promoter motif 20364352 20364359 taaatgta ...
T-box promoter motif 20362377 20362382 actttg ...
Z-box promoter motif 20364623 20364630 atacgtgt ...
SORLIP2 20363580 20363584 gggcc ...
SORLIP2 20365087 20365091 gggcc ...
SORLIP2 20365108 20365112 gggcc ...
SORLIP2 20363580 20363584 gggcc ...
SORLIP5 20365283 20365289 gagtgag ...

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