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Summary of properties of promoter region AT5G50630


Promoter ID Gene Description Chromosome Location Promoter Sequence Promoter Type Promoter Source Regulatory Network
AT5G50630 nodulin-like protein Chr5:20622174 - 20625176 Get Sequence Predicted TAIR ...

Current list of binding sites and references


Binding Sites in upstream region of AT5G50630

ColorKey for Binding Sites

Documented binding sites in a specific promoter Bindingsites in a specific TF or TF family and bindingsite motifs predicted in promoters
BS Name BS Genome Start BS Genome End Binding Site Sequence Binding Site Family/TF
AtMYC2 BS in RD22 20625049 20625054 cacatg BHLH
Bellringer/replumless/pennywise BS2 IN AG 20623153 20623160 aaattagt Homeobox
Bellringer/replumless/pennywise BS3 IN AG 20623152 20623159 actaattt Homeobox
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 20623474 20623479 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 20623756 20623761 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 20624042 20624047 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 20624813 20624818 actcat bZIP
ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH 20623467 20623472 actcat bZIP
W-box promoter motif 20624069 20624074 ttgacc WRKY
W-box promoter motif 20624806 20624811 ttgact WRKY
ARF1 binding site motif 20624002 20624007 tgtctc ARF
ARF1 binding site motif 20623952 20623957 tgtctc ARF
ARF1 binding site motif 20623825 20623830 tgtctc ARF
ARF1 binding site motif 20623342 20623347 tgtctc ARF
ARF1 binding site motif 20622878 20622883 tgtctc ARF
DPBF1&2 binding site motif 20622435 20622441 acacctg bZIP
DPBF1&2 binding site motif 20623687 20623693 acacttg bZIP
DPBF1&2 binding site motif 20625048 20625054 acacatg bZIP
MYB1 binding site motif 20623067 20623074 atccaacc MYB
MYB4 binding site motif 20622863 20622869 accaaac MYB
MYB4 binding site motif 20624902 20624908 aactaac MYB
MYB4 binding site motif 20623418 20623424 aactaac MYB
MYB4 binding site motif 20622522 20622528 aacaaac MYB
RAV1-A binding site motif 20622397 20622401 caaca ABI3VP1
RAV1-A binding site motif 20623547 20623551 caaca ABI3VP1
RAV1-A binding site motif 20623685 20623689 caaca ABI3VP1
RAV1-A binding site motif 20624174 20624178 caaca ABI3VP1
RAV1-A binding site motif 20625095 20625099 caaca ABI3VP1
RAV1-A binding site motif 20625022 20625026 caaca ABI3VP1
RAV1-A binding site motif 20624481 20624485 caaca ABI3VP1
RAV1-A binding site motif 20624466 20624470 caaca ABI3VP1
RAV1-A binding site motif 20623873 20623877 caaca ABI3VP1
RAV1-A binding site motif 20623724 20623728 caaca ABI3VP1
RAV1-A binding site motif 20623698 20623702 caaca ABI3VP1
RAV1-A binding site motif 20623565 20623569 caaca ABI3VP1
RAV1-A binding site motif 20623489 20623493 caaca ABI3VP1
RAV1-A binding site motif 20622844 20622848 caaca ABI3VP1
RAV1-A binding site motif 20622723 20622727 caaca ABI3VP1
RAV1-A binding site motif 20622554 20622558 caaca ABI3VP1
RAV1-A binding site motif 20622493 20622497 caaca ABI3VP1
RAV1-A binding site motif 20622241 20622245 caaca ABI3VP1
RAV1-B binding site motif 20622436 20622441 cacctg ABI3VP1
LFY consensus binding site motif 20624276 20624281 ccaatg LFY
ARF binding site motif 20624002 20624007 tgtctc ...
ARF binding site motif 20623952 20623957 tgtctc ...
ARF binding site motif 20623825 20623830 tgtctc ...
ARF binding site motif 20623342 20623347 tgtctc ...
ARF binding site motif 20622878 20622883 tgtctc ...
BoxII promoter motif 20624666 20624671 ggttaa ...
BoxII promoter motif 20624293 20624298 ggttaa ...
BoxII promoter motif 20622420 20622425 ggttaa ...
GATA promoter motif [LRE] 20622194 20622199 agatag ...
GATA promoter motif [LRE] 20622296 20622301 agatag ...
GATA promoter motif [LRE] 20624143 20624148 agatag ...
GATA promoter motif [LRE] 20624198 20624203 agataa ...
GATA promoter motif [LRE] 20624346 20624351 tgataa ...
GATA promoter motif [LRE] 20624389 20624394 tgataa ...
GATA promoter motif [LRE] 20624403 20624408 agataa ...
GATA promoter motif [LRE] 20624444 20624449 agatag ...
GATA promoter motif [LRE] 20624530 20624535 agataa ...
GATA promoter motif [LRE] 20625016 20625021 agataa ...
GATA promoter motif [LRE] 20624132 20624137 agataa ...
GATA promoter motif [LRE] 20622965 20622970 tgataa ...
GATA promoter motif [LRE] 20622366 20622371 agataa ...
L1-box promoter motif 20622330 20622337 taaatgca ...
T-box promoter motif 20622278 20622283 actttg ...
T-box promoter motif 20623267 20623272 actttg ...
T-box promoter motif 20623651 20623656 actttg ...
T-box promoter motif 20624511 20624516 actttg ...
T-box promoter motif 20622936 20622941 actttg ...
T-box promoter motif 20622653 20622658 actttg ...
SORLIP2 20623187 20623191 gggcc ...

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